Candidatus Baumannia cicadellinicola BGSS: IM45_1209
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Entry
IM45_1209 CDS
T03277
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bcib
Candidatus Baumannia cicadellinicola BGSS
Pathway
bcib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IM45_1209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcib03400
]
IM45_1209
Enzymes [BR:
bcib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IM45_1209
DNA repair and recombination proteins [BR:
bcib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IM45_1209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecD_N
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
Helicase_RecD
AAA_11
UvrD-helicase
SLFN-g3_helicase
AAA_22
SH3_13
DEAD
AAA_16
nSTAND3
AAA_24
MukB
AAA_28
AAA_33
AAA_29
PhoH
ResIII
AAA_18
Flavi_DEAD
SRP54
PIF1
FtsK_SpoIIIE
TrwB_AAD_bind
UvrD_C
ATPase
AAA
bpMoxR
AAA_7
AAA_5
Terminase_6N
NTPase_1
NACHT
AAA_25
Mg_chelatase
Zeta_toxin
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AIN47469
UniProt:
A0A088MZ29
LinkDB
All DBs
Position
637668..639551
Genome browser
AA seq
627 aa
AA seq
DB search
MEEIILQAQKLCLWRPLDIQFARMVAAPSHSPQALLLASACLSADVGLGHVCLPLLLLTP
KKLFDGRYPKLALQAWQQVGSLKLKAWQHLLLTSPSVSDGSRSTPLVLDNQRLYLHRMWR
YECTIAYFFQRQFRPRVVTDENRIRAVLNRLFPTKDQMINWHKIAIAVALIDQVVLISGG
PGTGKTTIVAKLLAAILLLSDNARLRIMIAAPTGKAAARLSESLAQAIQKMQLDNSLRQQ
IACQAITLHRLLGAQPNSQRMRYHNDNQLHIDVLIIDEASMVDFRMMANIIDALPAHTRV
IFLGDRYQLASVETGAVFRDLCQFANTGYSVQRCQELSRLTGYRLSTKKNHEGRYDSRYK
IADSLCLLRKSYRFNYHSGISRLAHAINVGDIQNTLALLNSKQYADIHYIPRREEQDYQK
MINDSITSYYYYLKLVYAGESPHAIIAKFNNYRLLTTLREGQFGVSGLNSSIEQMLMNYG
LIKKIGCSYAGRPIIILHNAPSLGLYNGDIGMVLSSGQHILCAYFILPDSSIKAVPISCL
PKHETAFAMTVHKSQGSEFTHTALVLPDNICPVLTRELLYTGVTRARQLLYIYAPDNGIL
AQTIATTIQRRSGLKERFLSEPNSYTL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaattatacttcaggcacaaaagctatgtttatggcgaccgttagatattcaa
tttgctcgtatggtggcagcgccatcacattcaccacaggcattattgctcgcaagcgct
tgtcttagtgctgatgtagggttagggcatgtctgtctaccgctattactattaacacct
aagaaactattcgacggtcgctacccaaaactagcgttacaagcgtggcaacaagttggt
agcctaaagcttaaagcttggcaacatttactactaacatcaccatccgtcagtgatggt
tcacgctcaacacccttagtactagataaccagcgtctttatttgcatcgtatgtggcga
tatgaatgcacaattgcgtatttttttcaacggcagtttagaccacgagttgtcactgat
gagaaccgtattcgtgccgtactaaataggctgttcccgaccaaagatcagatgattaac
tggcataaaattgctattgctgtagcgctaatcgaccaagtagtgctgatatcagggggt
cctggtaccggtaaaactacaattgtggctaaattactagcagcaatattgcttctaagt
gataacgcgcgtttgcgcataatgatagctgccccaactggtaaagccgctgcccgcttg
agcgagtcccttgctcaagcaatacaaaagatgcaattagataacagtttgcgacaacag
atagcttgtcaggctattactctacatcgattgttaggtgcgcaacctaatagtcagcgc
atgcgctaccataatgataatcagttgcatatagatgttcttattattgatgaagcatca
atggttgattttaggatgatggctaatattatcgatgctctgccggcgcacactagggtc
atttttcttggcgatcgctatcagttagcatcggtcgaaaccggagcagtatttagagat
ttatgtcaatttgcgaatactggttacagcgttcagcgctgtcaagaactatccaggttg
actggttatagactctctactaaaaaaaatcacgagggtaggtatgatagtaggtataaa
atagccgatagtctatgtttattacgtaaaagctaccgttttaactaccattctggtatt
agccgtttagctcacgctattaatgttggtgatatacaaaatactctagcgttactaaat
tcgaaacaatatgcggacattcactatatacctagacgagaggaacaggattaccaaaag
atgataaatgactctattactagctactactactatttgaaactggtatatgcaggtgaa
tcaccacacgctatcatagcaaagtttaacaattaccggttactaaccacactacgtgaa
ggtcaatttggtgtctctggcttaaatagtagtattgagcaaatgttgatgaactacggt
ctgattaagaaaataggctgcagttatgctggccggccgattataattctacataacgcg
ccgtcactcggtttatataacggagatattggaatggtgctttcgtccgggcagcatata
ctatgtgcgtattttatattgcctgatagcagcattaaagctgtgccaataagctgtctc
ccgaaacacgaaactgcttttgccatgacagtacataaatcgcagggatcagagtttacg
catacagcgctggtactaccagacaatatatgcccagtattaacacgtgagcttctatat
actggagtgactagagcacgccaactcctttatatttatgctcctgataatggtatccta
gctcagactattgctactactattcagcgtcgtagcggactaaaagaacggttcttatca
gaacctaacagctacacactctag
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