Niallia circulans: C2I06_10555
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Entry
C2I06_10555 CDS
T06357
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bcir
Niallia circulans
Pathway
bcir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C2I06_10555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcir03400
]
C2I06_10555
Enzymes [BR:
bcir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C2I06_10555
DNA repair and recombination proteins [BR:
bcir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2I06_10555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
HAP1_N
AAA_22
DEAD
nSTAND3
AAA_28
HHH_5
AAA
NTPase_1
AAA_16
T2SSE
AAA_17
TsaE
AAA_18
DUF4926
Folliculin_C
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AYV67281
UniProt:
A0A268F9Z1
LinkDB
All DBs
Position
complement(2145420..2147846)
Genome browser
AA seq
808 aa
AA seq
DB search
MNEQNSLDLFEKEKKYVKGRHLVTIFHNEQNLYSVIRIRVDETNHDYDDKEAVITGYLPK
MNEEETYTYFGDFKEHPRFGLQLQATSFRKEMPQTKQGVIAYLSSNLFKGIGEKTAENIV
DTLGEEAISKIMNQPSILETVPKLASDKAKILYDTLMKNQGLEQAMVSLNQYGFGPQLSM
KIYQVYKENTLEIVQTNPYKLVEDIEGIGFGKADDLGSQIGITGNHPDRLKAGCLYILEL
SSNQEGHVYLHAEFLLEKVKALLEENQKEEIEFSQIADQVIQLEEEGKIIVEDKKIYLPS
LFFSEKGLVRNIKRVMEQSEYKDQFPESEFLLALGNLEDRIGVQYAPSQREAIQTALMSP
MLILTGGPGTGKTTVIKGIVELYGELHGCSLEPNDYKKDEPYPFILAAPTGRAAKRMAES
TGLPAVTIHRLLGWNGTGTFERDEEHPLEGKILIVDETSMVDIWLAHQLFKALPEHIQVI
IVGDEDQLPSVGPGQVLKDLLDSACIPTVKLKDIYRQAEGSSIIELAHEMKKGQLPANLL
VPQGDRSFIKCSSSQIPQAIEKIVLNAKNKGFAPMDIQVLAPMYRGPAGIDRLNAILQEI
LNPNPDGTRKELKFGDVTYRIGDKVLQLVNQPESNVFNGDMGEIVSIFYAKENTEKQDMV
IVSFDGIEATYTRQDLNQITLAYCCSVHKSQGSEFPIVIMPVVKSYYRMLRRNLIYTGIT
RSKQFLILCGEVEAMELGVSRNDELNRQTTLKEKIKEAFADVYQPDETMEITKENSFDLL
YEGKINQIDPMIGMENISPYDFMEASES
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgagcagaactctttggatctttttgaaaaggaaaaaaagtatgtgaagggacga
catcttgttaccatttttcataatgaacagaatctttactctgtgataagaataagagtc
gatgaaacgaatcatgattatgacgataaagaagcggttattactggctatttgccaaag
atgaacgaagaagaaacgtatacatactttggtgattttaaagagcatccgagattcggt
ttacagctgcaggcaacttcctttcgaaaagaaatgccacaaacaaagcaaggggttatt
gcttatttatcgagcaacttatttaaagggattggggaaaaaacagcagagaatattgtg
gatacattaggagaagaagcaatctccaaaatcatgaatcagccatcgattttagagaca
gtgcccaaacttgcatcagataaagcgaaaatcctctatgatacattaatgaaaaatcaa
gggttagagcaagcaatggtttctttaaatcaatatgggtttggtccgcaattgtcgatg
aaaatttatcaagtatataaagaaaatacgctagaaatagtccagacaaatccatataaa
ttagtggaggatattgaagggattggttttggaaaagcagatgaccttggttcacagatt
ggaattactgggaatcatccagatcgattaaaggctggctgtttgtatatcttagagtta
agcagtaatcaggaaggccatgtctatctccatgccgaatttttactagaaaaagtaaaa
gccctgcttgaagaaaatcaaaaagaggagatagaattttcgcaaatagcagatcaggtt
attcagctggaggaagaagggaaaattatagtggaggataaaaaaatatatttaccttca
ttgtttttttcagaaaaaggacttgtacgaaatataaagcgagtaatggagcaatctgaa
tataaagaccaatttccagaatcggagtttctgctggcgttaggaaacttagaggaccgt
atcggtgttcaatatgctccctctcaacgagaagcgattcaaacggcgcttatgtccccg
atgctaattttgacaggtggtcccggaacggggaaaacaactgtcataaagggaattgtt
gaattatatggtgaattgcacggctgttccttagagcctaatgattataaaaaagatgaa
ccctatccatttattcttgcggcgccaactggccgagcggctaaacgaatggctgaatca
acaggtttaccagcagttactattcatcgattgctgggatggaatgggacaggaacattt
gaacgggatgaggaacatcctttggagggaaaaatcctcatcgtcgatgaaacctcgatg
gttgatatttggctagcccatcaattatttaaggctttacctgaacatattcaagtaatt
attgtaggagatgaagaccagctgccatcagtaggaccgggccaagtattaaaagatcta
cttgattcagcatgtattcctactgttaagttgaaagatatttatcgacaagcggaagga
tcatcgataatcgagctggcacatgaaatgaaaaaaggccagctgccggctaatcttctt
gtgcctcaaggggatcgttcatttataaaatgctcttccagtcaaattccgcaggcaatt
gaaaaaattgttttgaatgcgaaaaacaaaggctttgcgccaatggatattcaagtattg
gcaccgatgtatagaggaccagcaggaattgaccgcttaaatgccatcttacaggaaatc
ttaaatcctaatccagatggcaccagaaaagaactgaaatttggagatgttacataccgg
atcggtgataaagtccttcagctagtcaatcaaccagaaagcaatgtttttaatggtgat
atgggtgagattgtatcgatcttttatgcgaaggaaaatacggaaaagcaagatatggtt
attgtttcgtttgatggaatagaagcaacctatacgcgacaggatttaaatcaaattacg
ctggcttattgctgttctgtccataaatcacaaggcagtgagtttccaatcgtcattatg
cccgtcgtcaaaagttattatcgcatgttaagaagaaatttaatttacaccggaataact
agaagtaaacaatttttgattctttgtggagaagtggaagcaatggaattaggcgttagc
cggaatgatgaactaaatcggcaaacaaccttaaaagaaaaaatcaaagaggcatttgcc
gatgtatatcaaccagacgagacgatggaaataacaaaagagaattcatttgatttattg
tatgaaggtaaaatcaatcaaatcgatccaatgattggaatggaaaatatctccccatat
gattttatggaagcatctgaatcctaa
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