Niallia circulans: C2I06_11385
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Entry
C2I06_11385 CDS
T06357
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bcir
Niallia circulans
Pathway
bcir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C2I06_11385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcir03400
]
C2I06_11385
Enzymes [BR:
bcir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C2I06_11385
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C2I06_11385
DNA repair and recombination proteins [BR:
bcir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C2I06_11385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn-ribbon_8
OrfB_Zn_ribbon
Dak1
Motif
Other DBs
NCBI-ProteinID:
AYV67433
UniProt:
A0A268FAC4
LinkDB
All DBs
Position
complement(2333779..2334606)
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AA seq
275 aa
AA seq
DB search
MPELPEVETVRKTLKQLTQNKVIKEVVVSWAKMIKKPENVEEFSDALVGQTILDVKRRGK
FILIETNDFTIVSHLRMEGKYGVFQAQEPVDKHTHVIFFFEDGSELRYKDVRKFGTMHLF
KKGEESNAMPLSQLGPEPFAADFTIANFSERLSKTNRSIKTALLDQKIVVGLGNIYVDES
LFRSGIHPERTANSLDVKEIEKLYKEIIATLSEAVEKGGSTIRSYVNTQGQIGMFQLELY
VYGRKGQECKVCGHTLERIIVGGRGTVFCPNCQKK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagttgaaacggtacgaaaaacgctgaaacagctgacgcaaaat
aaagtaataaaagaagtggttgtatcatgggcaaaaatgattaaaaaaccagaaaatgtg
gaagaattttcggatgcattggttggtcaaaccattttagatgttaaaagacgtgggaaa
tttatattaattgaaacaaatgattttaccatcgtctcccatttgcgaatggaaggcaaa
tatggagtatttcaagcacaagagccagttgataagcatacccatgttattttctttttt
gaagatggttcagagctacggtataaagatgtccggaaattcggtaccatgcatttattt
aaaaaaggggaagaatcaaacgccatgcctctttcgcaattaggacctgaaccttttgct
gctgactttacgatagcgaatttttcagagcgtttatcgaaaacaaatcgcagtatcaaa
acagcattgttggatcaaaagattgtggttgggttaggaaatatatatgtagatgaatct
ttatttcgaagtggcattcatccggagagaacagcaaattccctagatgtgaaagaaata
gaaaaattatataaagaaatcatcgctactttatctgaagcggtcgaaaaaggtggtagc
acgattcgctcttatgtaaacacccaaggacaaattggaatgtttcagcttgaactatat
gtatatggtcgtaagggccaagagtgcaaagtatgtggccatactttagaaagaattata
gtcgggggaagaggaaccgttttttgtcctaattgccaaaaaaaataa
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