Burkholderia orbicola: Bcenmc03_3387
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Entry
Bcenmc03_3387 CDS
T00669
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD family
KO
K03086
RNA polymerase primary sigma factor
Organism
bcm
Burkholderia orbicola
Pathway
bcm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bcm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Bcenmc03_3387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcm03021
]
Bcenmc03_3387
Transcription machinery [BR:
bcm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bcenmc03_3387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
KORA
Sigma70_ner
Motif
Other DBs
NCBI-ProteinID:
ACA92541
UniProt:
B1K1W2
LinkDB
All DBs
Position
2:240152..241687
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AA seq
511 aa
AA seq
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MTTPRPTPRADTPLDPIIQLLALAGEQGYLTHADLVDALPPESDSPDALDVVRAALADIG
IAVLDEPAVPAPFAGAAPVEVDRDALDEGRAMLGDLARGTSASTDPLALYMRRMHAVPLL
TREGEIVLAREIETGRHQVLHAIAGYPPAVDVLLERHRTRSATGANGSPDEEDGETPAPA
RYDALQAAVSALRDALHAHGSRSANYRDARNHVAALLGSLAWVAPAVDDASRAVRALAAA
SDDPSTADAAYFDAVARRALAAALSDGQQKVRDATRAMLEANLRLVLSIARKYLNRGVDL
SDLVQDGCLGLMRAIEKFEYRRGFKFSTYATWWIRQAIARAVADRSRTIRVPVHVGDQYQ
RVQRHALRFRQRTGRRATPAELAAETGLDEGKLRAVLALPAEPVSLDTPLPDADTGLVEL
IEDQASASPFEQLADTRMRECVRALLRSVTPTEADVLRRRFGLGGAEPDTYDAIAQDAGM
SRERVRQIEKRALAALRTAAEAENAQSFLDA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgactacgccacgccccactccccgggcggacacaccgctcgatccgatcatccagctg
ctggcgctcgccggcgagcagggttatctgacgcacgccgacctcgtcgacgcgctgccg
cccgaaagcgacagccccgacgcgctcgacgtcgtgcgcgccgcgctggccgacatcggc
atcgcggtactcgacgagccggccgtgcctgcaccgtttgccggcgcggcgccggtcgag
gtcgatcgcgacgcgctcgacgaaggccgggccatgctcggcgacctcgcacgcggtacg
agcgcgtcgaccgatccgctcgcgctctacatgcggcgcatgcatgcggtgccgctgctc
acgcgcgaaggcgaaatcgtgctcgcccgcgagatcgagacgggccgtcatcaggtgctg
cacgcgattgccggctatccgcccgcggtcgacgtgctgctcgagcgtcatcgcacgagg
agcgcaaccggcgcaaacggatcgcccgacgaagaggatggcgaaacgcccgcgcccgcc
cgctacgacgcgctgcaggcagcggtgtcggcactgcgcgatgcactgcatgcgcatggc
agccgttcggccaactaccgcgacgcgcgcaaccacgtggccgccctgctcggttcgctc
gcgtgggtcgcgccggccgtcgacgacgcgagccgtgcggtgcgcgcgctcgcggccgcc
tccgacgatccttcgacagccgatgccgcgtacttcgacgcggtcgcacggcgcgcactg
gcagccgcgctgagcgacggccagcaaaaggtacgcgatgcgacgcgagcaatgctcgag
gcgaatctgcggctcgtgctgtcgatcgcgcgcaagtacctgaaccgcggcgtcgacctg
tccgatctcgtgcaggacggctgtctcggcctgatgcgcgcgatcgagaaattcgaatac
cggcgcgggttcaagttctcgacttacgcgacctggtggattcgccaggcgatcgcgcgt
gcggtcgcggatcgatcgcgcacgatccgcgtgccggtgcacgtcggtgatcagtaccag
cgcgtgcagcggcatgcgctgcgctttcgccagcgcacgggtcgccgcgccacgccggcc
gagctcgcggctgaaaccggcctcgacgaaggcaagctgcgcgcggtgctcgcgctgccc
gccgagccggtgtcgctcgacacgccgctgcccgacgcggacacgggcctcgtggaactg
atcgaggatcaggcatcggccagcccgttcgagcaactggccgacacgcgcatgcgcgaa
tgcgtgcgggcgctgctgcgctcggtcacgccgaccgaggccgacgtgctgcgccggcgg
ttcggcctcggcggcgccgagcccgacacctacgacgcgatcgcgcaggatgcggggatg
tcgcgggaacgtgtgcggcagatcgaaaaacgggcgctcgccgcgctgcgtacggccgcc
gaagccgagaacgcgcagtcgtttctcgacgcgtaa
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