Evansella cellulosilytica: Bcell_3193
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Entry
Bcell_3193 CDS
T01389
Name
(GenBank) ATP dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
bco
Evansella cellulosilytica
Pathway
bco03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Bcell_3193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bco03400
]
Bcell_3193
Enzymes [BR:
bco01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Bcell_3193
DNA repair and recombination proteins [BR:
bco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Bcell_3193
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
CYTL1
Motif
Other DBs
NCBI-ProteinID:
ADU31435
UniProt:
E6U0J0
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All DBs
Position
3402845..3403789
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AA seq
314 aa
AA seq
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MNIDFIKPFEPVQANIVPQGNEWIYEMKWDGVRIINYYNGDNVRLFNRKQNERTQQFPEL
LDIHSYCKASSVILDGEVIALGENGKPSFHQVMRRDALRNMDKVKQLIPILSVFYCIFDI
VYYNDEWVNDWHLSDRKDLLSEIITPNEFIQLTPSYDDGETLFDVTKQQGMEGIVAKKLS
STYAFGGKDNRWLKIKNFQDIIAVVGGVTYRNGIVNAILLGLYDNDMNLHYIGHAGTGKL
TQNDWRILTNFVDQLKIAQKPFVNEPERAKDAQWIKPSLTVKIKYIEWPKGRSIRQPSIQ
SFVDIPPTECLLPK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgaacatcgacttcattaaaccttttgaacctgttcaagcaaatatcgtgcctcaagga
aatgaatggatttatgaaatgaaatgggatggtgttaggattatcaattattataacggt
gataatgtccgtctttttaatcgaaagcaaaatgaacggacacaacagtttcctgaatta
ctagacattcactcatattgtaaggcaagttctgtcatattagatggtgaagtgatcgca
ctcggcgaaaatggaaaaccatccttccatcaagtgatgcggagagatgcacttcgcaat
atggataaagtaaagcaactaattccaatcttgtcagtattttattgtatatttgatatc
gtttattacaatgatgagtgggtaaacgattggcatttgtcagataggaaagatctttta
tcggaaattataacacctaatgagttcatacaattaaccccttcctacgatgatggtgaa
actctttttgatgtaacaaagcaacaaggtatggaaggaatcgtagcaaaaaagctaagt
agtacttatgcttttggaggtaaagataacaggtggctaaaaataaaaaacttccaggat
atcattgctgtagttggcggcgtcacataccgaaacgggattgttaatgccatattactt
ggcttatacgacaacgatatgaaccttcattatatcgggcatgctggcactggaaaacta
acacaaaatgattggagaatacttactaatttcgtagaccaattaaaaattgcacaaaaa
cctttcgttaatgagcctgaacgcgctaaggacgcacaatggataaagccgagcttaact
gtgaaaataaagtatatagaatggccaaaaggacgttccattcgacagcccagcattcaa
tcatttgtcgatataccaccaacggaatgtctcttaccaaaatga
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