Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_1036
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Entry
BF29_1036 CDS
T03712
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bcoa
Heyndrickxia coagulans DSM 1 = ATCC 7050
Pathway
bcoa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BF29_1036 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcoa03400
]
BF29_1036 (mutM)
Enzymes [BR:
bcoa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BF29_1036 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BF29_1036 (mutM)
DNA repair and recombination proteins [BR:
bcoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BF29_1036 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn-ribbon_8
NFACT_N
Auto_anti-p27
DZR
Motif
Other DBs
NCBI-ProteinID:
AJH79937
LinkDB
All DBs
Position
complement(1000963..1001796)
Genome browser
AA seq
277 aa
AA seq
DB search
MPELPEVETIRRTLAQLVAGETIESVTVLLPKMVKKPLSTEAFADALAGETIRSLGRRGK
FLIFYTDHYALVSHLRMEGRYRVYGQNEPVEKHTHMIFHFQSGKELRYKDVRKFGTMHLF
LKGEELSSLPLSKLGPEPLSDAFTEKYLYGKLKKTERNVKSCLLDQTVISGLGNIYVDEA
LFRARIFPERKAKSLTKKDVHLLHSEIIQTLQEAVEKGGSTVRSYVNSQGQMGMFQLELY
VYGRKGEPCRKCGTPIEKMVTAGRGTHYCPNCQKKRR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccggaagtggaaacgatacgaagaacgctggcacagctcgttgccggc
gaaacgattgaaagcgtaacggtgcttttaccgaaaatggtcaaaaagccgcttagcaca
gaggcgtttgccgatgccctggccggtgaaacgatccgttcgctcgggcggcgcggcaaa
tttctcattttttacacggaccattatgcacttgtctcccatttgcgcatggaagggcgg
taccgggtttatggccaaaatgagccggttgaaaagcatacgcatatgatttttcatttt
caatccgggaaggaactaaggtacaaagatgtccgcaaattcgggacgatgcatctgttt
ttaaagggagaggaactgtcctcgctcccgctttcgaaactcggccctgagccgttatcc
gatgcgtttacggaaaaatatttatacggcaaattaaagaaaacggaacgcaatgtcaaa
tcctgtttgctcgatcagacggtcatttccgggctagggaatatttatgtggacgaagcc
ttgttccgcgcccgcatctttccggagcggaaagcaaagtcgctgacaaaaaaagacgtg
catcttttacacagcgagatcatccaaacgctgcaggaagccgttgaaaaaggcggcagc
acggtccgttcctatgtaaattcacaagggcagatgggcatgttccagctcgaactgtat
gtttacggccggaaaggggagccgtgccggaaatgcggcaccccgattgaaaagatggtt
acagcaggccgcggcacccattactgcccgaactgccaaaagaaacgcagataa
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