Baudoinia panamericana: BAUCODRAFT_120861
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Entry
BAUCODRAFT_120861 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
bcom
Baudoinia panamericana
Pathway
bcom03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BAUCODRAFT_120861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcom03400
]
BAUCODRAFT_120861
Enzymes [BR:
bcom01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
BAUCODRAFT_120861
DNA repair and recombination proteins [BR:
bcom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
BAUCODRAFT_120861
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
DNA_ligase_A_C
BRCT
DNA_ligase_IV
LIG3_BRCT
MEA1
ECT2_BRCT0
TMEM232
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
19107542
NCBI-ProteinID:
XP_007674809
JGI:
Bauco1_120861
UniProt:
M2N1Y8
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MYGHGAMTEAELNEKYPNRPHNHSKTLPFHDLYLTLFNPLNENKKKPSGPVTARKKVGPF
GAPSTPNDIRRSIIERFISRWRKEVGNDIYPAFRLIVPEKDRDRGMYGLRETTLGKLFVR
VMKIDKNSEDGYNLLHWKLPGIKASSAMAGDFAGRCFEVISKRPMRATPGNMTIAEVNEL
LDRLSVAQKEENQQPIVEEFYKRMNAEELLWLIRMILRQMKIGATEKTIFESWHPDAENL
FNISSSLRRVCWELYDPDVRLVGTQRGINLMQCFQPQLAAFQMRSMDIMVSRMNPTEDDP
VFWIEEKLDGERMQLHMIEDEEIPGGKRFGFWSRKAKDYTYLYGKDFSDETAALTRYLKD
AFNVGVRNIILDGEMITWNPAEDTVVPFGHLKTAALSEQANPYAEGNRPLYRVFDCLYLN
DTDLTQYTLRKRREALEASVNTIHRRMEIHEYFEATKASDIEPHLRRVVAEASEGLVLKN
PRSRYRLNERNDDWIKVKPEYMTEFGEELDCVVIGGYYGSGHRGGRLSSFMCGLRVDDDI
RASSQGTNPQKCYSFFKVGGGFSASDYAEVRHQTEGKWIDWDAKNPPKEWIELGGGWERQ
FEKPDVWIKPEDSIVLSVKAASVTTTDQFRTLVTLRFPRFKKIRTDKDWKSALSVHEFNS
LKQRAETEKHEKQFKIDDARRKRTSRKRKRGLVVQGQDEHVTTPYAGPATKVFEGLSFFV
LSEALKPQKSSKADLEQLIKANGGNVVASEKDSKTLLVADRNLVKVASLQKRDERNIVRP
CWLFDCIKQGELLPFEPQHLFYTISTDAGKFDDAVDEYGDSYARDATPDELLTLFNRMPS
RSIAANDSATDNKSVAYDTPIENGDTISVPQLIEQLHLENQLDTLPGWMFHGVRVYCTGA
LAETRRRLDFAGAHISEDLDDASLTHVIIPADSARAKEIRQAIASKKRLPRLCIPAWVED
SWREKTRLDEDRYAPP
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtcatggtgcaatgacggaggcagagctgaacgaaaagtatcctaaccgaccc
cataatcactccaaaaccctcccttttcatgatctctacctaacgctcttcaaccctctc
aatgagaacaaaaagaagccgtcaggaccagtaacggctcgcaagaaggtaggtcctttc
ggcgcgccttctacgcccaacgatatccgcaggtctatcattgagcgcttcatctcgagg
tggcgtaaggaagttggcaacgacatctatccggcctttcgcctcattgtgcccgagaag
gatcgggaccgtggcatgtacgggctcagggagacgacgctgggcaaactgttcgttcgt
gtcatgaagatcgacaagaatagtgaagacggatacaatctgcttcactggaagctacct
ggcatcaaagcttctagtgccatggctggcgatttcgccggccgctgcttcgaggttatc
agtaagcgtccaatgcgagcaacgcccggcaacatgacaatcgctgaggtcaatgaactg
ctcgaccggctgtcggtggcgcagaaggaagaaaatcaacaacccattgtcgaagagttc
tacaaacgcatgaacgccgaggagcttctgtggcttatccggatgattttgcggcagatg
aaaataggcgccaccgagaagacgatctttgagagctggcatccggatgctgagaatctc
ttcaacatctcgagcagtctgcgtcgcgtctgctgggagctgtatgatccagatgtcagg
cttgtggggacgcagcgcggtatcaacctcatgcaatgctttcagccgcagcttgcagcg
ttccaaatgcgctccatggatattatggtgtcccggatgaaccccaccgaggacgaccct
gtcttctggatcgaggagaagcttgacggcgagcggatgcaactgcacatgatcgaagac
gaagaaataccaggtggcaagcgcttcggcttctggtcacggaaggcgaaagactacaca
tatctgtacggcaaagactttagcgacgagaccgctgccttgacacgttatctaaaggac
gcattcaatgttggagtccgcaatatcatcttagacggcgagatgatcacttggaacccc
gctgaggacacagtggtaccatttgggcatctcaagacagcggccctttccgagcaggcc
aacccatatgccgaaggcaaccgtccattataccgagtcttcgactgtctgtaccttaat
gatacagatctcacgcagtacaccctacgcaaacgccgcgaggctctcgaggcaagcgta
aacaccatacatcggcgcatggagattcacgagtatttcgaagctaccaaggcctctgac
atcgagcctcacctgcgccgcgtcgtcgcagaggcaagcgaaggcttggtgctgaagaac
ccacgctcgcggtaccgtctcaacgaacgtaacgatgactggatcaaagtcaagcccgaa
tatatgacagagttcggcgaggagctcgactgcgttgttattggtggctactatggctct
gggcaccgcggaggcagactcagcagcttcatgtgcggactgcgggtcgatgacgatatt
cgcgcgtcctcacaaggcacaaatccgcaaaagtgctactccttcttcaaagttggtggt
ggcttctccgcgtctgattatgctgaggttcgtcaccagaccgagggcaagtggatcgat
tgggatgcaaagaacccgccaaaggagtggatcgaactcggcggaggctgggagagacag
tttgagaagcctgatgtttggatcaagcctgaggactcgatagtgctgtcggttaaagcc
gcctcagtcaccaccaccgaccaattcagaacgcttgttaccctgcgcttcccgcggttc
aagaagatacgcaccgacaaggactggaagtctgcattgtcagttcacgaattcaacagc
ctcaagcagcgtgccgagaccgagaaacacgaaaagcaattcaagatcgatgatgcaaga
cgaaagcgcacgagtcggaagcggaagcgaggtcttgtcgttcaaggccaggacgaacat
gtcacgacgccgtacgctggacctgcaaccaaagtctttgaaggcttgagcttcttcgtt
ctgtcggaggcgctaaagccgcagaagagcagcaaagccgacttggagcagctgatcaag
gcgaacggcggaaacgtggtagcgtcggagaaggactcgaaaacgctcctggtcgcggac
agaaaccttgtgaaggtggcaagcttgcaaaagcgtgatgaaaggaatattgtccggcca
tgctggcttttcgactgcatcaagcagggtgagctgctgcccttcgaaccgcagcatctc
ttctacactatttcgacggatgcaggaaaatttgatgatgctgtcgacgaatatggtgac
agctatgcaagagacgcaacacctgacgagctgttgacactcttcaaccgcatgccctcc
cgaagcatagctgcaaacgactcagcgactgacaataagtctgtggcttacgatacgcca
atcgaaaacggagacaccatcagcgtgccgcagctcatagagcaattgcacctggaaaac
cagctcgatacactgcccggctggatgttccacggtgtcagagtctactgcacaggggcg
ttagccgagacaagacgacgtcttgacttcgctggtgctcacatcagtgaggatcttgac
gatgctagtttgacgcacgtcatcatccctgctgactctgctcgggccaaggagatcaga
caagcgattgcttcgaaaaagcgtctgccaagactttgtatacccgcatgggtggaagat
agttggcgggagaagacaagactggatgaagaccgctatgcgccgccataa
DBGET
integrated database retrieval system
