Baudoinia panamericana: BAUCODRAFT_212912
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Entry
BAUCODRAFT_212912 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
bcom
Baudoinia panamericana
Pathway
bcom03013
Nucleocytoplasmic transport
bcom03015
mRNA surveillance pathway
bcom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BAUCODRAFT_212912
09122 Translation
03013 Nucleocytoplasmic transport
BAUCODRAFT_212912
03015 mRNA surveillance pathway
BAUCODRAFT_212912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcom03019
]
BAUCODRAFT_212912
03041 Spliceosome [BR:
bcom03041
]
BAUCODRAFT_212912
Messenger RNA biogenesis [BR:
bcom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
BAUCODRAFT_212912
TREX complex
BAUCODRAFT_212912
Spliceosome [BR:
bcom03041
]
Complex C
Other components
EJC/TREX
BAUCODRAFT_212912
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
BAUCODRAFT_212912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
19109752
NCBI-ProteinID:
XP_007678912
JGI:
Bauco1_212912
UniProt:
M2LI59
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MAFERCLILPPPRLRTSAYDIRLPQSTANGDGDEHPTAKSVANRRMTVNRIARMTADWVH
DRFEDDRYDHRRPAHEDRYETAGRPRETGGTKLRVDNIHYELTEEDIRGLFERKGPLVSV
KLLYDRADRSQGTAFVTYEDPRDARDAVADYDGQNANGQPIRITTMPTAPAAPTAPSKAN
LSMFERIERPTRSMFERMDSSALDSSREGGAGRRRRERSDSPLRSRPIPEHIDRYVPGRD
SRSPMPRRGAPREPGRRPGARREDSGRGGRPARTDDDGRPLRGGRPRKTAEELDAEMEDY
WGSKQDDRPNGAPANGGSANADDDEDMVL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcgaaaggtgccttatcctccctcctcctagacttcgcacatccgcctacgac
attcgactgcctcaatcaacagcgaacggcgacggcgacgagcatccaaccgcgaagagt
gtagctaaccgccgcatgactgtcaacagaatcgccaggatgaccgctgactgggttcac
gatcgcttcgaggatgatagatatgaccaccggcgtccggcacatgaagaccgctacgaa
acagctggtagacccagagaaactggtggcaccaagcttcgtgtcgacaacatccattat
gaactgacagaggaagacattcgcggacttttcgagcgcaaaggcccgctagtttctgtg
aaactgctctacgaccgtgcagatcgtagtcaaggcacggcgtttgtaacgtacgaagac
cctcgtgacgctcgtgatgctgttgcggactatgacggccagaatgcaaatgggcagcca
atacggatcacaactatgccaacagcgcctgccgcacctaccgcaccctcgaaagcaaac
ttgagcatgttcgaacgcatcgaacgtccaacaagaagcatgttcgagcggatggatagc
tctgcgctagacagtagcagagaaggtggtgcaggcagacggcgcagagagaggagtgac
agtcctctgcgcagtcgtccgattcctgagcatatagatcggtatgtacctggtcgcgac
tcacgctcgccaatgccacgccgcggggcgccccgtgagcctggaagaaggcctggcgca
agaagggaagacagtggcagaggtgggcggcctgcacgaacggacgatgatggcaggccg
ctgagaggtggccgtccgcgaaagacggccgaagagctcgatgctgagatggaggactac
tggggcagcaagcaggacgacaggccgaatggcgcacctgcgaacggcggttctgcaaat
gcggatgatgatgaggacatggtcttgtaa
DBGET
integrated database retrieval system