KEGG   Baudoinia panamericana: BAUCODRAFT_212912
Entry
BAUCODRAFT_212912 CDS       T03106                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
bcom  Baudoinia panamericana
Pathway
bcom03013  Nucleocytoplasmic transport
bcom03015  mRNA surveillance pathway
bcom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bcom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    BAUCODRAFT_212912
  09122 Translation
   03013 Nucleocytoplasmic transport
    BAUCODRAFT_212912
   03015 mRNA surveillance pathway
    BAUCODRAFT_212912
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcom03019]
    BAUCODRAFT_212912
   03041 Spliceosome [BR:bcom03041]
    BAUCODRAFT_212912
Messenger RNA biogenesis [BR:bcom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     BAUCODRAFT_212912
    TREX complex
     BAUCODRAFT_212912
Spliceosome [BR:bcom03041]
 Complex C
  Other components
   EJC/TREX
    BAUCODRAFT_212912
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    BAUCODRAFT_212912
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 19109752
NCBI-ProteinID: XP_007678912
JGI: Bauco1_212912
UniProt: M2LI59
LinkDB
Position
Unknown
AA seq 329 aa
MAFERCLILPPPRLRTSAYDIRLPQSTANGDGDEHPTAKSVANRRMTVNRIARMTADWVH
DRFEDDRYDHRRPAHEDRYETAGRPRETGGTKLRVDNIHYELTEEDIRGLFERKGPLVSV
KLLYDRADRSQGTAFVTYEDPRDARDAVADYDGQNANGQPIRITTMPTAPAAPTAPSKAN
LSMFERIERPTRSMFERMDSSALDSSREGGAGRRRRERSDSPLRSRPIPEHIDRYVPGRD
SRSPMPRRGAPREPGRRPGARREDSGRGGRPARTDDDGRPLRGGRPRKTAEELDAEMEDY
WGSKQDDRPNGAPANGGSANADDDEDMVL
NT seq 990 nt   +upstreamnt  +downstreamnt
atggcgttcgaaaggtgccttatcctccctcctcctagacttcgcacatccgcctacgac
attcgactgcctcaatcaacagcgaacggcgacggcgacgagcatccaaccgcgaagagt
gtagctaaccgccgcatgactgtcaacagaatcgccaggatgaccgctgactgggttcac
gatcgcttcgaggatgatagatatgaccaccggcgtccggcacatgaagaccgctacgaa
acagctggtagacccagagaaactggtggcaccaagcttcgtgtcgacaacatccattat
gaactgacagaggaagacattcgcggacttttcgagcgcaaaggcccgctagtttctgtg
aaactgctctacgaccgtgcagatcgtagtcaaggcacggcgtttgtaacgtacgaagac
cctcgtgacgctcgtgatgctgttgcggactatgacggccagaatgcaaatgggcagcca
atacggatcacaactatgccaacagcgcctgccgcacctaccgcaccctcgaaagcaaac
ttgagcatgttcgaacgcatcgaacgtccaacaagaagcatgttcgagcggatggatagc
tctgcgctagacagtagcagagaaggtggtgcaggcagacggcgcagagagaggagtgac
agtcctctgcgcagtcgtccgattcctgagcatatagatcggtatgtacctggtcgcgac
tcacgctcgccaatgccacgccgcggggcgccccgtgagcctggaagaaggcctggcgca
agaagggaagacagtggcagaggtgggcggcctgcacgaacggacgatgatggcaggccg
ctgagaggtggccgtccgcgaaagacggccgaagagctcgatgctgagatggaggactac
tggggcagcaagcaggacgacaggccgaatggcgcacctgcgaacggcggttctgcaaat
gcggatgatgatgaggacatggtcttgtaa

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