Bradysia coprophila: 119074237
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Entry
119074237 CDS
T08269
Name
(RefSeq) endoribonuclease ZC3H12A isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
bcoo
Bradysia coprophila
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119074237
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
119074237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH
zf-CCCH_2
RuvA_C
Motif
Other DBs
NCBI-GeneID:
119074237
NCBI-ProteinID:
XP_037036154
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MMSSNNDLDDNFSGGTAKDICLDKKDNFIRIKRKHICVLLNNLEKISLLFGVKLVHVNKC
ESNVSKEVKFACEPDCEDLNPCEVAANIQQYIDSLSVAEAEDSSYDSDGDADDSHEQVSR
TTSDTLGQEFAEYVSQPISNQDRSPGYTQRVEFALKLGYTERLVQAALARLGPNPAQNEL
LAELIKLGAQQGNKSEFICDSPLAECLSPITDTPVTICDDGNGLRPIVIDGSNVAMSHGN
KEIFSCRGIKLSVEWFKSRGHKDITVFVPKWRKESSRPDNPIKDQDILLELEKERLLVFT
PSRFVGGKRTVCYDDRYILKLASQNDGIVVSNDNYRDLVQESCEFKKVVAERVLMYSFVN
DHFMPPDDPLGRSGPTLDNFLRIQPKKGDPPPPCPYGKKCTYGNKCKFHHPERGTGPHKS
VTERLSEHAARHLSARNSDGQNKTVIQGKSLSVPLSSSGETSPVSGDRRKPLSRTRSGVV
PDSSFSNATVLENLSNATNQQNLSTNWDQSFTNQGFPKSHSIENISREAYTHGPTTYSGL
WSRPQQNSTAQSCQAQAQCSTQIPQQSQDSDDSSNLHRKLRRQLTLNPAGCDPRIYQMQM
NQQQQQQQQQQSKLPQQHHSPHRPLAPSLSGPRSHHPSQWDLHQNVTRIASAPDPSRPWQ
TGPPPASTSEPHINLWSQHRATTPILSAQDHRCHIYYHLASIFPEEEVQTVMHLYPEETN
PQTICAAILNMFPKM
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgagtaacaatgatctggatgacaatttttcgggaggaaccgcaaaggatatt
tgcttggacaaaaaggataatttcattcggattaagcgaaagcatatttgtgtgttgttg
aataatttggagaaaatatcattgctgttcggtgtgaaattagttcatgttaataaatgt
gagagtaatgtgagcaaagaagttaaatttgcctgtgagcccgattgcgaagatctgaat
ccatgcgaagtagcagcaaatattcagcaatacatcgattcgttgtccgtagccgaagca
gaagattctagttacgattcagatggcgatgcggacgactcacacgagcaggtatccaga
acgaccagtgatacacttggccaggaatttgctgagtatgttagtcaaccaatatcaaac
caggatcgatcgcctggctacacacaacgtgttgaatttgcactgaaactcggttatacc
gaacgtctagtccaagcagcattggcacgtctgggtccaaatcctgcacaaaacgaactt
ttagctgaattaataaaattaggtgcacaacaaggcaataaaagtgaatttatatgtgat
tcgccgttggcagaatgtttatcaccaataacggatacaccagtaactatatgcgatgat
ggaaatgggttacggcctattgttattgatggaagtaacgttgctatgagccatggcaac
aaagaaatattctcgtgtcgaggtattaagctgtctgtggagtggttcaaaagtcgcggc
cataaggatatcactgtttttgtgccaaaatggaggaaagagagttctaggcctgataat
cccattaaggatcaagatatactgttagagttggagaaagagcggcttcttgtttttact
ccatcacgatttgtcgggggtaagaggactgtatgctacgatgatcgatacattttgaag
ctagcatcgcagaacgacggaatcgttgtgtcaaatgacaactaccgtgacctagtgcag
gaaagttgcgaatttaaaaaagtcgttgctgaacgggtactgatgtattcatttgtcaat
gaccactttatgcctccagatgacccgttaggtcgttctggaccaacattagacaacttc
ttacgtatacagccaaaaaaaggggatcccccacctccttgtccatatggaaagaaatgt
acttacggtaataaatgcaaattccatcatcctgaaagaggcacaggaccacacaagtca
gtgacggagcgattgtccgagcatgcagcacgtcacttatcagccagaaactctgatggt
caaaacaaaactgtgatccaaggaaagtcgttgagtgtgccactgtcgagtagcggtgaa
actagtcctgtcagtggggatcgacgtaaaccattaagtcgaaccagatctggtgtagta
ccggattcttccttctcaaatgccacagtattagaaaatctgtcgaacgcgaccaaccaa
caaaacttatcaacgaattgggatcagtctttcactaatcaagggttcccaaagtcacac
agtatagaaaacatatcaagagaggcatacacacatggtcctaccacgtacagtggattg
tggtcccggccacagcagaactcaacagcacagtcgtgtcaagcacaggctcaatgttcc
acacaaataccgcaacaatctcaagacagcgatgatagttcaaatttacatagaaaatta
cgacgacagttaacactaaatccggctggttgtgatccaagaatttatcaaatgcaaatg
aatcaacaacaacaacaacaacagcagcagcagtcaaaattaccgcaacaacatcattcg
ccgcatcgtccgttagcaccatctctcagtggtccccgctcacatcatccgtcacaatgg
gacctgcatcagaatgtaacacgcattgcatcagcacccgatccatcgcgtccatggcaa
accggaccaccaccggcatcaacgtcagagcctcacataaatttatggtcacagcatcga
gccacaacgccaattctatcggcacaggatcaccgctgtcacatttactaccatttggcc
agtatatttcccgaagaagaagtgcaaaccgtgatgcatttgtatccagaagaaactaat
cctcaaaccatttgtgcggcgatattaaatatgttcccgaagatgtaa
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integrated database retrieval system
