Bradysia coprophila: 119081194
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Entry
119081194 CDS
T08269
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119081194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119081194
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119081194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
119081194
NCBI-ProteinID:
XP_037045805
LinkDB
All DBs
Position
Unknown
AA seq
220 aa
AA seq
DB search
MSNTSDTNTEDIIRPMHCELHALTRSDGSALLTQGETAVMASVYGPIEVRLQNLRIDKAH
VEVYYRPKSGLPSVGDRLREQMIRNTCETALLSVLYPRTAITIQLQEMEDNEGLIACSVN
AACLALISSGLSMKFLIGAVHCIVDANSDIILDPNHRQSAEAVAHFTFVFDSVQKSTVAL
HTSGKYTIGQYNDALVRCKEACHLVFQFYKEAVKKFAKVL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatactagtgacaccaacacagaagacattattcgaccaatgcactgtgaattg
cacgcattgactcgatctgatgggtctgctttgctcacacaaggagaaacggcagtgatg
gcatccgtgtacggtccaattgaggtgagactacaaaatctgcgtattgataaggctcat
gtcgaagtttattatcggcctaaaagcggacttcccagtgttggtgaccggttaagagag
cagatgatacggaatacctgtgaaacggcgctactatctgtcctatatccgcgaacggca
ataactatacagttacaagaaatggaggacaatgaagggctgatcgcatgttctgtaaac
gctgcctgcttggcattgattagcagcggtttgtccatgaaattcctaatcggagccgtt
cattgcattgttgatgcaaatagtgacataatactcgatccaaatcatcgacaatcggcc
gaagcagtggctcattttacattcgttttcgatagcgtgcagaagagcacggtagcactt
catacatcgggtaaatacacaattgggcagtacaatgacgctctggttcgctgtaaagaa
gcttgtcatttggtgttccaattttataaggaagcggtaaaaaaatttgcaaaagttctg
tga
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