Bradyrhizobium commune: IC761_24325
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Entry
IC761_24325 CDS
T09283
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bcou
Bradyrhizobium commune
Pathway
bcou03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IC761_24325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcou03400
]
IC761_24325
Enzymes [BR:
bcou01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IC761_24325
DNA repair and recombination proteins [BR:
bcou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IC761_24325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QPF89621
UniProt:
A0A7S9D1T2
LinkDB
All DBs
Position
5144702..5146144
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AA seq
480 aa
AA seq
DB search
MQYITLDTETDFDGWRKAARSLVLHHVTPTDVTWTVQGGEAELFAPPAPSPILEVNDGTF
NVSAKFVDLAQAAILHCDPERFAILYRLLFRLKDNHDLIEVATDPDVAQVTAMARAVHRD
EHKMHAFVRFREIGRERAAHYVAWFEPEHHIVELAAPFFAKRFADMPWSILTPDLCAHWD
GHALSFTPGVSKSEAPGEDRLEETWRRYYASIFNPARLKVKAMQTEMPKKYWRNLPEASI
IKPLIEDAERMTGAMIAKAAADPHKPQKRPEAPMTRKPAADDLDALREEAAHCRACPLYK
DATQTVFGEGPKDATIMLVGEQPGDKEDLVGHPFVGPAGQMLDRALEEAGVDRKTVYVTN
AVKHFKFLPRGKIRLHQKPATPEIKACRQWYEREVSAIQPDLIVAMGATAAQSVFGKITP
VGKTRGRLIDLPDGRKALVTVHPSYLLRLPGPEAKALEYQRFVEDLKIAAALQKKTPRAA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacatcaccctcgataccgaaaccgatttcgacggctggcgcaaagccgcgcgt
agcctcgtgcttcaccacgtgacgcccaccgatgtcacctggaccgtgcagggcggcgaa
gcggaattgttcgcgccgccagcaccgtctccgatccttgaggtgaatgacggcactttc
aacgtctcggcaaaattcgtcgacctcgcccaggctgcaatcctgcattgcgatcccgag
cgctttgcgatcctctatcgcctgctgtttcggctaaaggacaatcacgatctcatcgag
gtcgcgaccgatcccgacgtcgcgcaggtcacggcgatggcaagagccgttcatcgcgac
gagcacaagatgcacgccttcgtgcgcttccgcgagatcggcagggagcgtgcggcacat
tacgtcgcctggttcgagccggagcatcacatcgtcgagctcgccgcgccgttcttcgcc
aagcgctttgccgacatgccctggtcgatcctgacgcccgacctctgtgcgcattgggat
ggccacgcgctctcgttcacgccgggcgtcagcaagagcgaggcgcccggcgaagaccgg
cttgaggaaacctggcggcgctactacgccagcatcttcaatccggcgcggttgaaggtg
aaagcgatgcagaccgagatgccgaagaaatactggaggaacctgcccgaggcatcgatc
attaagcccctgatcgaggacgccgagcgcatgaccggcgccatgatcgccaaagccgcc
gccgatccgcacaagcctcaaaaacgaccggaggctccgatgacacgcaagcccgcagcc
gacgatctcgacgcgctccgcgaggaagccgcccattgccgcgcctgcccgctctacaag
gacgcgacccagaccgtgttcggcgaaggtccgaaagacgccaccatcatgctggtcggc
gagcagcccggcgacaaggaagacctcgtcggccatcccttcgtcggcccggccggccag
atgctcgaccgggcgttggaggaagcgggcgtcgaccgcaagacggtctatgtcaccaat
gcggtcaagcacttcaaatttctgccgcgtggaaaaatccgcttgcatcagaagccggca
acgccggagatcaaagcctgccggcaatggtatgagcgcgaagtctcggcgatccagccc
gatctcatcgtggcgatgggcgccaccgccgcgcaaagcgtgttcggcaagatcaccccg
gttggcaagacccgcggccggctgatcgaccttcccgacggtcgcaaggcgctggtgacg
gtgcatccgtcctatctgctccggttgccgggcccggaagccaaggcactggaatatcag
cgctttgtcgaagatctaaagatcgccgccgctttgcagaagaaaaccccgcgcgcggct
tga
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