Bacillus cereus AH187: BCAH187_A4456
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Entry
BCAH187_A4456 CDS
T00799
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bcr
Bacillus cereus AH187
Pathway
bcr03030
DNA replication
bcr03430
Mismatch repair
bcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BCAH187_A4456 (holA)
03430 Mismatch repair
BCAH187_A4456 (holA)
03440 Homologous recombination
BCAH187_A4456 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcr03032
]
BCAH187_A4456 (holA)
03400 DNA repair and recombination proteins [BR:
bcr03400
]
BCAH187_A4456 (holA)
Enzymes [BR:
bcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BCAH187_A4456 (holA)
DNA replication proteins [BR:
bcr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BCAH187_A4456 (holA)
DNA repair and recombination proteins [BR:
bcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BCAH187_A4456 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ACJ82087
UniProt:
B7HPM2
LinkDB
All DBs
Position
complement(4129912..4130922)
Genome browser
AA seq
336 aa
AA seq
DB search
MSDIHKKIKKKQFAPLYLLYGTEAFFINETIKLITTEALEEEDREFNVVTYDLEEAYLED
VVEDARTLPFFGERKVLLIKSPLFLTSQKEKLEQNIKILEEYIGEPSPFSILVFVAPYEK
LDERKKITKLLKKTADVVEANAMQVQDVQKWIVARADEVHVHIDHAAVSLLLELVGSNVT
MLAKEMDKLTLYVGMGGEITPKLVAELVPKSVEQNVFALTEKVVKKDIAGAMQILDGLFT
QQEEPIKLLALLVSQFRLLHQVKELQQRGYGQNQIASHIGVHPYRVKLAMNQTKFFSFEE
LKKVIMELAEADYSMKTGKMDKKLVLEFFLMRLNHM
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatatacataaaaagattaaaaagaagcagtttgctccattatatttactgtat
ggaacggaagcgttttttataaatgaaacgataaagcttattacaacagaagcgcttgaa
gaggaagatcgcgagtttaatgttgttacatatgatttagaagaagcgtatttagaagat
gtggttgaggatgcacgtacacttccttttttcggagaacgtaaagtgctattaataaaa
tcaccgctctttttaacttcacaaaaagaaaaattggaacaaaatataaaaattttagaa
gaatatatcggggaaccttctcccttttctattcttgtttttgttgcgccttacgaaaag
cttgatgaacgaaaaaaaattactaaactgttaaagaaaacagcggatgtagtagaagcg
aatgcaatgcaagtgcaggatgttcagaagtggattgttgctcgggcggatgaagtacat
gtgcatattgatcatgcggctgttagtttgttgttagagcttgtgggaagtaatgtaaca
atgttggcgaaggaaatggacaagttaacgttatacgtcggtatgggcggagagattaca
ccaaaactcgttgcagagcttgtaccaaaatcagttgaacaaaatgtgtttgctttgaca
gaaaaagtggtgaaaaaagatatcgcgggtgcgatgcaaattttggatggattatttacg
cagcaggaggaacctattaaattgcttgcgttattagtaagtcaattccgtttactgcat
caagtgaaagagttacagcagcgtggttacggccaaaatcaaatcgcgtctcatattggt
gtgcatccatatcgtgtaaaattagcgatgaatcaaacgaagtttttctcttttgaagaa
ttaaaaaaagtgataatggaattagcggaagctgattatagtatgaaaacgggaaaaatg
gataaaaaacttgtgctcgagtttttcttaatgcggttaaatcatatgtga
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