Bacillus cytotoxicus: Bcer98_2470
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Entry
Bcer98_2470 CDS
T00560
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bcy
Bacillus cytotoxicus
Pathway
bcy03030
DNA replication
bcy03430
Mismatch repair
bcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bcer98_2470
03430 Mismatch repair
Bcer98_2470
03440 Homologous recombination
Bcer98_2470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcy03032
]
Bcer98_2470
03400 DNA repair and recombination proteins [BR:
bcy03400
]
Bcer98_2470
Enzymes [BR:
bcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bcer98_2470
DNA replication proteins [BR:
bcy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bcer98_2470
DNA repair and recombination proteins [BR:
bcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bcer98_2470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DNA_pol_A_exo1
RNase_H_2
DEDDh_C
Tautomerase_3
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ABS22706
UniProt:
A7GRE8
LinkDB
All DBs
Position
complement(2564124..2568425)
Genome browser
AA seq
1433 aa
AA seq
DB search
MSLTNEQQERFHILLQQLQIPEDLVNQYLQGGGIQKLVVDKANKSWHFALQVPRILPTEL
YELLERQLKQSFSHIAKTSFALETESKQFTEEEVKAYWSLCTERITISPMFAYLKKQLPH
VNGVKLLLDVKNELEATALKKNVAKSVGDQYEAFGFPRFQVDTNVKKNDEEVQKFREQTQ
QEDRQRVIQAMEEMAKKQAEESEVVHEGPVVLGYLIKPDEEITPLREIQDEERRKTVQGY
VFHVETKELRSGRTLLTLKITDYTDSIMIKMFSRDKEDIPVLQSLKKGMWIKARGSVQND
TFVRDLVMIANDINEITGPSRKDKAPEGEKRVELHLHTPMSQMDAVTSVSQLIAQAGKWG
HEAIAITDHAVAQSFPEAYSAGKKAGIKVIYGVEANLVNDGVPIAYNEEHRLLEDETYVV
FDVETTGLSAVYDTVIELAAVKVKGGEIIDRFESFANPHQPLSATIIELTGITDDMLTDA
PEVGEVFKKFQAWMGDHTLVAHNASFDMGFLNVGFKKCGLDKPKNPVIDTLELARFLFPD
MKNHRLNTLCKKLDIELTQHHRAIYDTEATGYLLAKMLKEVIEKGFEYHDQLNDSMGQGD
SYKRGRPSHVTLLATSDEGLKNLYKLISYSHVNYFYRVPRIPRSLLKKHREGILVGTACD
KGEVFEAMMQKAPEEVEEIAQFYDYIEVMPPEVLRHLVELELVRDEGQLKTIISNLVKLG
ETLDKPVVATGNVHYLNPEDAIYRKILISSQGGANPLNRHSLPPVYFRTTDEMLDCFSFL
GEEKAKEIVVTNTQKIASLIGEVHPVKDDLYTPKIEGADDETRDMSYKMARSIYGEELPE
IVEARLEKELKSIIGHGFAVIYLISHKLVKKSLIDGYLVGSRGSVGSSFVATMMEITEVN
PLPPHYVCPKCKQSEFFNDGSVGSGFDLPDKNCPNCNVPYKKDGHDIPFETFLGFKGDKV
PDIDLNFSGEYQPRAHNYTKVLFGEDYVYRAGTIGTVAEKTAYGYVKGYASDHNLTIRNA
EVDRLVAGCTGVKRTTGQHPGGIIVVPDYMDIFDFSPIQYPADSVGAEWRTTHFDFHSIH
DNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFSSPESLGVTEEQINCKTG
TLGIPEFGTKFVRQMLEETKPTTFSELVQISGLSHGTDVWLGNANELIYNGTCTLSEVIG
CRDDIMVYLIYQGLDPSLAFKIMESVRKGKGVPEEWEEEMRNNNVPGWYIDSCKKIKYMF
PKAHAAAYVLMAVRIAYFKVHFPLLFYAAYFTVRADDFDVDVMAKGSASIRAKIEEIAQK
GLDASPKEKSLLTVLEMTLEMCERGYSFQKVDLYRSHATDFIIDGDTLIPPFNAVSGLGT
NAAISIVEARKNGDFLSKEDLQQRSKLSKTIIEYLDSQGCLGDLPDQNQLSLF
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaacgaatgaacagcaagagcgttttcatattttacttcagcaattacaaata
ccagaagatcttgtgaatcaatatttacaaggcggaggtattcaaaagctagttgttgat
aaggcgaacaaaagctggcattttgctttacaagtgccgcgtattttgccaacagaactg
tatgaattgcttgaaagacagcttaagcagtcattttctcatattgcaaaaacatcattt
gcactagaaactgagagcaaacagtttacggaagaagaagtgaaagcgtactggtcgcta
tgtacagagagaattacaatttctcctatgtttgcatatttaaaaaaacaacttccccat
gtaaatggtgtgaagttgttactagatgtaaagaatgaattagaagcaacagcattaaag
aaaaatgtagctaagtctgttggtgatcaatatgaagcttttggattcccacgatttcaa
gtggatactaatgtgaagaaaaatgatgaagaagttcaaaagtttagagaacaaacgcag
caagaagatcgacagcgcgtcatccaagctatggaagaaatggcgaagaaacaagctgaa
gaaagcgaagttgtgcatgaaggtccagttgtactcggttatctcattaaacctgatgaa
gaaattacaccgctgcgtgaaattcaagacgaggaaagaagaaaaaccgttcaagggtat
gttttccatgtggaaacgaaagaacttcgtagcggacgtacattattaacgttaaaaatc
acggattacacagactccattatgataaaaatgttctcgcgtgataaggaagatattcca
gtattacaatcgctgaaaaaaggaatgtggattaaagcgcgagggtcggttcaaaatgat
acgtttgttcgcgatttagtgatgattgcgaatgatattaacgaaatcacaggaccttct
cgtaaagataaagcaccagagggggaaaagcgagtagagctgcatttgcatacaccaatg
agccaaatggatgccgtgacatcagtatctcagcttattgcacaggctggaaaatgggga
catgaagcgattgcgattaccgatcatgctgtggcgcaatctttcccagaggcatattca
gcagggaaaaaagcagggataaaggtcatttatggtgtagaagcaaacttagtcaatgat
ggagttccaattgcttataatgaagaacacagattgcttgaggatgaaacatatgttgtt
tttgacgttgaaacaacaggattgtctgcggtatatgatacggtgattgaattagcggca
gtaaaggtaaaaggcggagaaattatcgaccggtttgaatcatttgcaaatccgcatcaa
ccgctatcagcgacaatcatcgagttaacaggcattacagatgatatgttgacagacgca
ccagaagtaggagaagtatttaaaaagtttcaagcgtggatgggcgatcacacacttgtt
gctcataatgcaagttttgatatgggattcttaaatgtagggtttaaaaaatgtggttta
gataaaccaaagaatccagttatcgatacattggagttagctagattcctattcccagac
atgaagaatcatcgtttaaatacattgtgtaaaaagcttgatattgaattaacgcagcat
caccgtgcgatttatgatacggaagcaacaggatatttacttgcgaaaatgctgaaagag
gttattgaaaaaggatttgaatatcatgaccaattaaatgacagcatgggacaaggcgat
tcgtataaacgaggaagaccaagtcacgttacgttgcttgctacgtctgatgaaggacta
aaaaacttatacaaacttatttcctattcgcatgtgaattatttttatcgtgtaccgcga
ataccgagatcgttattgaaaaagcatcgagaaggtatattggtagggacagcttgtgat
aaaggtgaagtatttgaagcgatgatgcaaaaagcaccggaagaagtagaagaaattgcg
cagttttatgattatattgaagtaatgcctccagaagtattacgacatttagtagagcta
gaattagttcgagatgaaggacaattgaaaacgattatttctaatttagtaaaattaggt
gaaacgttagacaaaccagttgttgcgactggtaatgtccattatttgaatccagaagat
gccatttatcgcaaaattttaatcagttcacaaggcggggcaaatccgttaaatcgtcat
tctttaccaccggtatatttccgtacaacagatgaaatgctagattgtttctctttctta
ggggaagaaaaagcaaaagaaattgttgtcacaaatacacaaaaaattgcatcgttaatc
ggtgaggttcatccggtaaaagacgatttgtatacaccgaaaattgaaggtgcagacgat
gagacgcgcgatatgagttacaaaatggcgcgcagtatttatggagaagagcttccggaa
attgtagaagctcgtttagaaaaagaattaaaaagtattattgggcatggttttgctgtt
atttatttaatctcacacaaattggtgaaaaagtcacttatagatggttatcttgtaggt
tcacgtggctcggttggatcatcatttgttgcgacaatgatggaaattacagaagtaaat
ccattgccgccgcattatgtatgtccaaagtgtaagcaatcagaattctttaacgatggt
tctgttggatctggttttgacttaccggacaaaaattgtccaaactgtaatgttccatat
aaaaaagacggacatgatattccattcgaaacgttccttggttttaaaggagataaggta
ccggatattgatttgaatttttccggagaatatcagccgcgtgcacataattacacaaag
gtgctatttggtgaagattatgtgtatcgtgctggaacaattggtacagttgcagagaaa
acagcttacggttatgtaaaagggtatgcgtcggatcacaatttaacaatccgaaatgcg
gaagtggatcgccttgttgcaggatgtacaggtgtaaaacgtacaactggacagcatcca
ggtggtattatcgttgtaccagattacatggatatcttcgatttctcaccaattcagtat
cctgctgactctgttggggcagaatggagaacgacacactttgacttccattccatccat
gataatttactgaaacttgacatacttggacacgatgatccaactgttattcgtatgtta
caagatttaagtggaattgatccaaagacaataccaacagatgaccccgaagtaatgaag
attttttcaagtccagaatctttaggggtaacagaggaacaaattaattgtaagacaggt
acacttggtataccggagtttggaacaaaatttgtaagacagatgttagaggaaacaaaa
ccaacaacattttccgagcttgtccaaatttctggactatcgcacggtacagacgtatgg
cttgggaatgccaacgagttgatttataacggtacatgtacattaagtgaagttatcggt
tgtcgcgatgacatcatggtgtatttaatttatcaaggactagatccatcattagccttt
aaaatcatggaatcagtgcgtaaaggtaaaggcgtgccggaagaatgggaagaggaaatg
cgtaataacaatgtacctggatggtatattgattcatgtaagaagattaagtatatgttc
cctaaggcacacgcagcagcttacgtattaatggctgtacgcattgcctatttcaaagtg
cattttccgctcttattctacgcagcatactttacagtacgagctgatgattttgatgta
gatgtaatggcaaaagggtcagcgtcaattcgcgcaaaaattgaagagattgcacaaaaa
ggattggatgcttcgccaaaagagaagagtttgttaactgtattagaaatgacattagaa
atgtgtgaacgtggttattctttccaaaaagttgacttataccgttcgcatgcaacagat
tttattatcgatggagatacattaattcctccatttaacgcagtgtctggtctagggaca
aacgcagcaattagtattgtagaagcgcgtaaaaatggcgactttttatcaaaagaagat
ctgcagcaaagaagtaagctctctaaaacaattattgagtatttagatagccaaggttgt
ttaggagatttaccagatcaaaaccaattatcactgttctaa
DBGET
integrated database retrieval system
