Bacillus cytotoxicus: Bcer98_3271
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Entry
Bcer98_3271 CDS
T00560
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bcy
Bacillus cytotoxicus
Pathway
bcy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bcer98_3271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcy03400
]
Bcer98_3271
Enzymes [BR:
bcy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Bcer98_3271
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Bcer98_3271
DNA repair and recombination proteins [BR:
bcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bcer98_3271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ABS23490
UniProt:
A7GTN2
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All DBs
Position
complement(3337160..3337990)
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AA seq
276 aa
AA seq
DB search
MPELPEVENVRRTLENLVTGKTMKDVIVTYPKLVKRPDDAELFKELLRGETIERIERRGK
FLLLYVTNYVIVSHLRMEGKYFLCKSDDPVDKHTHVRFQFTDGTELHYKDVRKFGTMHLF
TKGEEYKEMPLADLGPEPFDPELTVEYLQKKLQKTNRKIKVALLDQRLLVGLGNIYVDEV
LFRSGIYPEREASSLAKNEIEKIHAATVATLTEAVKRGGSTIRSYINSQGEIGSFQNLLN
VYGKKGEPCVTCGTAIEKIVVGGRGTHYCPHCQPRN
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattaccagaagttgaaaatgtaagaagaacacttgaaaatcttgtaacagga
aaaacaatgaaagatgtaattgtaacatatcctaaattagtgaaacgaccagatgatgca
gagctttttaaagaactgttgcggggggaaacgattgaacgaattgaacgaagaggaaaa
tttcttcttttgtatgtaacaaattatgtaattgtttcacatttgcgcatggaagggaaa
tatttcctttgtaaaagtgatgacccagttgataagcatacacatgtacgctttcaattt
acggatggtacagagctccattataaagatgtaagaaagtttggaacgatgcatcttttt
acaaagggagaggaatacaaagagatgccgcttgctgatttaggaccagaaccatttgac
cctgagctaacagtggagtatttgcaaaagaaattacaaaagacaaaccgcaaaataaaa
gttgcattattagatcagcgacttttagtggggcttggaaatatatatgtagatgaagtg
ttgttccgttccggtatttatccagaacgagaagcttcatctcttgcaaaaaatgaaatc
gaaaagattcatgctgcaacagtagcaacattaacagaagcagtgaagcggggtggcagc
acaattcgatcgtatatcaattcacaaggagaaattggttctttccaaaatctgttgaat
gtatacggaaaaaaaggtgaaccatgtgtaacatgtgggacagccattgaaaaaatagta
gttggtggacgcggtacgcattattgcccgcattgtcagccgagaaactaa
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