Cytobacillus dafuensis: FSZ17_16590
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Entry
FSZ17_16590 CDS
T06982
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bda
Cytobacillus dafuensis
Pathway
bda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FSZ17_16590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bda03400
]
FSZ17_16590
Enzymes [BR:
bda01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FSZ17_16590
DNA repair and recombination proteins [BR:
bda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FSZ17_16590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_12
AAA_22
nSTAND3
AAA_17
AAA_18
AAA_16
T2SSE
UvrD_C
NTPase_1
AAA
HHH_5
AAA_28
DEAD
DUF4926
TsaE
Motif
Other DBs
NCBI-ProteinID:
QED50183
UniProt:
A0A5B8ZD57
LinkDB
All DBs
Position
complement(3466076..3468505)
Genome browser
AA seq
809 aa
AA seq
DB search
MEKQDLQGSLDLYSEQEKKYIKGRHLVTIFHNEQNLYTVLRIRVEETNHHYEDKEAVITG
YFPKMHEQETYIFYGELKEHPKFGVQLHANHYRKDIPQTKQGVVNYLSSELFKGIGKKTA
ENIVEVIGENAITKILNEPSLLDQIPKLPSEKAKSLYDTLMEHQGLEQAMIALNQYGFGP
QLSMKIYQVYKELTIGIIQNNPYKLVEDIEGIGFGRADELGYKLGISGNHPDRIKAAILY
VLEVESMQAGHVYMEARELLQSTKMLLEENKRDGIEFNDISNEVIKLEEEGKIIGEEQKL
YLPSLYFSEKGLVTNIKRILKQTQYDEQFPESEFLLALGNLEERLKVQYAPTQKEAIQTA
LMSPMLILTGGPGTGKTTVIKGIVELYAELHGCSLNPKDYKKEEPFPFLLAAPTGRAAKR
MAESTGLPAVTIHRLLGWNGTEGFDRHEESPLEGKILIVDETSMVDIWLAHQLFKALPDN
LQVILVGDEDQLPSVGPGQVLKDLLRSERVPTVRLTDIYRQAEGSSIIELAHEMKKGKLP
MNVTAQQADRSFFQCHPSQISTVVEKVVMNAKKKGYTAKDIQVLAPMYRGPAGIDKLNEI
LQEIFNPNPDGTRKELEFGDVKYRIGDKVLQLVNQPENHVFNGDMGEIVSIFYAKENTEK
QDMIVVSFDGAEATYTRQDLNQITHAYCCSVHKSQGSEFPIVILPVVKSYYRMLRRNLLY
TAITRSKQFLILCGEVEALRIGVERADEQARLTTLTEKLQETLEERNSAHATSDPTEIAL
TYEEELMNINPLIGMENITPYDFMEKENN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaggacttgcagggttctctcgatttatattcggaacaagaaaagaagtac
ataaaaggtaggcatcttgttacgatatttcataatgaacaaaatttatatactgtttta
cgtattcgtgttgaagaaacaaatcatcattatgaagataaagaggccgttattaccggt
tattttccaaaaatgcatgagcaggagacatatattttttatggcgaattgaaagaacac
ccgaaatttggagtccagcttcatgccaatcattatcggaaagacattccacaaactaaa
cagggcgtagtaaattatttatcaagtgagctctttaagggaattggaaaaaaaactgct
gaaaatattgtagaggtaatcggagaaaatgcaataactaagattttaaatgagccttcc
ttacttgatcaaattcccaaacttccttcagaaaaagcaaaatcattatatgacacgctt
atggagcatcaagggctcgagcaggccatgatcgcattaaatcaatatggatttgggccg
cagctgtcgatgaagatttaccaagtctataaggaattaacaattgggattatccaaaat
aacccatacaaattagtcgaggatattgaggggataggatttggcagggcagatgagctc
ggatacaagcttggtatttccggaaatcatccagatcgaataaaagcagccattttatat
gttttagaagtagaaagcatgcaagctggacatgtatatatggaagcaagagagcttttg
caaagcaccaaaatgcttcttgaggaaaacaagcgagacggcatcgagttcaatgacatt
tcaaatgaggttattaagcttgaagaagagggtaagattattggagaagaacagaaattg
tacttaccttctctttatttttctgaaaaaggccttgtaacaaatattaaaaggatttta
aagcaaacgcagtacgatgaacaatttccggagtccgaatttctgctcgcattaggaaat
ttagaggaacgccttaaagtgcaatatgcccctacgcagaaagaagcaattcaaacagcc
ttaatgtctccaatgctcattttaactggcggaccaggtaccggaaaaacaacggttatt
aaagggattgtcgaattatatgcagaattacatggctgctcgttaaatccaaaggattat
aaaaaagaggaaccctttccatttctattagctgcacctacgggaagagcggctaagagg
atggctgaatcaaccggtttacctgctgtaacgatacacaggctacttggatggaatggc
actgagggatttgatcgtcatgaggaaagtccattagaaggaaaaatattaatcgttgac
gaaacctcaatggttgatatttggctagctcatcagctgtttaaagccctccctgataat
ttgcaggtcattcttgtaggggatgaggatcagcttccttctgttggcccgggtcaggta
ttaaaggatttgcttcgctctgagcgagttcctactgttagattaacagatatataccga
caagcagaaggatcatctattattgagcttgcccatgaaatgaagaagggtaagctgcct
atgaatgtgaccgcacagcaagccgacagatccttttttcaatgccatccaagtcaaatc
tctaccgtagtggagaaagtagtaatgaatgctaagaaaaagggttatacagcaaaggac
attcaagtattggctccaatgtataggggacctgctggaatagataagctaaatgaaatc
cttcaagaaatttttaatccaaatccagatggaactcgcaaagagctcgaattcggagat
gttaaatatagaataggggataaagtcctccagcttgtaaatcagcctgaaaatcatgtt
tttaacggggatatgggggaaatcgtctctattttttatgccaaagaaaacacagaaaaa
caggatatgattgtcgtttcctttgatggagcagaagcaacttatacacgacaggattta
aatcaaattacacatgcatactgctgttctgttcataaatcacagggaagtgagtttccc
attgttattcttccagttgttaaaagctattatcgaatgctgagaaggaatttactttat
accgcgattactcggagtaagcaatttttaatattatgtggagaagtagaagcacttaga
ataggcgtggaaagagcagacgagcaagccagactgaccactctaactgaaaaacttcaa
gaaacgctcgaagaaaggaattctgctcatgccacctctgatcctacagaaatagctttg
acatatgaggaagaactaatgaatatcaatcctttaatcggtatggaaaacataacaccg
tatgattttatggaaaaagaaaataactag
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