Bdellovibrio sp. NC01: DOE51_10825
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Entry
DOE51_10825 CDS
T06360
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bdc
Bdellovibrio sp. NC01
Pathway
bdc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DOE51_10825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdc03400
]
DOE51_10825
Enzymes [BR:
bdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DOE51_10825
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DOE51_10825
DNA repair and recombination proteins [BR:
bdc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DOE51_10825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QDK38045
UniProt:
A0A514WX21
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All DBs
Position
complement(2237661..2238473)
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AA seq
270 aa
AA seq
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MPELPEVEIVKRGLAEILEDHPRLEKIELKRKDIRSPIPAKKLSTLVGEKITSVQRRAKY
LLLWTPKGAMLSHLGMTGTWRVAPKGDERSHDHIYLHFSNGLRLAYRDPRRFGVFDFVTD
PATHPSLKNLGPEPLSKDFTGESLWESLCKKNIAIKVAIMDQKVVVGVGNIYASEALFAA
GIKPSLPASKLSLDRAKILVREIQNVLSESIKAGGSSISDFEHASGDSGYFQDRFKVYDR
AGEPCVVCGTHIRSKVMGGRNTFWCGHCQK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttaccagaagtcgaaatcgtgaaacgcggtcttgcagaaatccttgaagat
catccgcgtttagaaaaaatcgaactcaaacgcaaagatattcgcagtcctattcctgct
aaaaaattaagcaccttggttggcgagaagatcacttctgtgcagcgtcgagcgaagtac
ttgctgttgtggacgccgaaaggggcgatgctttcacatctgggaatgaccggaacgtgg
agggtggcgccaaaaggagatgagcggtctcatgaccatatctaccttcatttttctaac
ggtctacggttggcgtatcgtgatccgcgacgtttcggcgtgtttgatttcgtgaccgat
cctgcgacgcatccaagccttaaaaatctgggacccgagccgctttcgaaagactttacc
ggcgaaagtttatgggaaagtctgtgtaagaaaaatattgcgatcaaagtggcgatcatg
gatcaaaaagtggtcgttggtgtcggcaacatttacgctagcgaagcgttgtttgcggca
ggaattaagccgtcacttccagcctcaaaactctctctggacagagcgaaaatcctggtg
cgtgagattcaaaatgtgctttcagaatccatcaaagcgggtggatcttcgatcagcgat
ttcgaacatgcttcgggtgatagtggatacttccaagatcgcttcaaagtgtatgaccga
gcgggagaaccatgtgttgtctgcggtacacacattcgatcgaaagtgatgggtggtcga
aataccttctggtgcggccattgccagaaataa
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