Bdellovibrio sp. NC01: DOE51_15905
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Entry
DOE51_15905 CDS
T06360
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
bdc
Bdellovibrio sp. NC01
Pathway
bdc00300
Lysine biosynthesis
bdc00550
Peptidoglycan biosynthesis
bdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bdc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DOE51_15905
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DOE51_15905
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bdc01011
]
DOE51_15905
Enzymes [BR:
bdc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
DOE51_15905
Peptidoglycan biosynthesis and degradation proteins [BR:
bdc01011
]
Precursor biosynthesis
Amino acid ligase
DOE51_15905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QDK38964
UniProt:
A0A514X0V1
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All DBs
Position
complement(3312455..3313942)
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AA seq
495 aa
AA seq
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MNLQHLFSALAGVPENVFSHLDVTGLYNDARKVTPGSIFVAIPGVKVDGHSFIPDAIAKG
ATALVVQDKAKVPAHFQGVVLAVPNTREALDILAARFYAEPAEELFCIGVTGTNGKTSVT
YMTEAILNFGKIPTGVIGTVNHHLGDKVWPSDMTTPDPIFLQKRLREFRDEGAKAVAMEV
SSHALDQHRVDSVQFNTAIFTNLTRDHLDYHQTMENYFEAKQKLFTDLLWKTSKNPSFAI
INTDDKLGRRLKVADPAVLWTYGSKDADFRYKIRRMDFALTHFHVETPIGEGEIHLPMSG
VHNVMNSLAALAAGMSAGMPLQMCCDALSNFTGVPGRLQSVPNSKNVAVFVDYAHTPDAL
ENVLTALTRVRESLQTKSRIWTIFGCGGDRDKGKRPLMAEMALKYSDHVIITSDNPRTED
PQAIINDILAGVHDKSKSTVIVDRKEAIYDTIAKVQEGDVVLIAGKGHEDYQIIGTEKFP
FSDVIIADQALKQRA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaatctacagcaccttttttctgcgttagcaggagttccagaaaatgttttttctcac
ttagacgttacgggtctttataacgacgcacgtaaggtcactcctggttctattttcgtt
gcgattcctggtgtgaaagtggatggtcacagcttcattcccgatgcgatcgctaaaggt
gctacggcacttgtcgttcaagataaagcaaaagttccggctcatttccaaggagtggtt
ctagctgtaccgaatacgcgcgaggctttagatatcttagccgcgcgtttttacgctgaa
cctgctgaagaacttttttgtatcggtgtcacaggtaccaacggcaaaacttctgtcacc
tacatgacagaagcgattttaaatttcggaaaaattcctacaggcgtgatcggcactgtg
aatcatcatttaggcgataaagtgtggccctcagatatgacgactccagatcctatcttc
ttgcaaaaacgtctgcgtgaattccgtgatgaaggtgcgaaagctgtcgcgatggaggtt
tcgtcgcacgccttggatcaacatcgtgtcgatagtgtacagttcaatacggcgatcttc
acaaatttaactcgtgatcatttggattatcaccaaacgatggaaaactattttgaggcg
aaacaaaagctcttcacggatctgttgtggaagacaagtaagaatccctcatttgcgatt
atcaacaccgatgataaattaggtcgtcgtttgaaagtggcagatccggcagtgctgtgg
acttatggttctaaagacgctgacttcagatacaaaatcagaagaatggattttgccctg
acacacttccatgtggaaacgccgattggcgaaggtgaaattcatctgccgatgtcgggc
gtacataacgtgatgaactctttggcggctttggctgcgggtatgtcggcgggcatgccg
ctgcaaatgtgttgtgatgctttatcaaacttcacaggtgtgccggggcgtctgcaatcc
gtgccgaattctaagaatgtggcggtctttgtcgattatgctcatactcctgatgcactt
gagaatgttttaacagcgttgactcgcgttcgtgaaagtctgcaaacgaagtcacgcatt
tggacgatctttggttgcggtggtgatcgcgataaaggcaaacgtcctttgatggctgaa
atggcgcttaaatattctgatcacgtgattatcacttcagacaatccacgcacagaagat
ccgcaagcaatcatcaacgacattcttgccggagttcacgacaagtcgaagtcgactgtg
atcgtcgatcgtaaagaagcgatctacgatactatagcaaaagttcaagaaggcgacgtt
gttctgatcgccggtaaaggtcatgaagactaccaaatcattggaacagaaaaatttccg
tttagcgatgtgatcattgccgatcaagcgttaaagcaaagggcttag
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