Bifidobacterium dentium Bd1: BDP_0283
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Entry
BDP_0283 CDS
T01143
Symbol
ddlA
Name
(GenBank) ddlA D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde00470
D-Amino acid metabolism
bde00550
Peptidoglycan biosynthesis
bde01100
Metabolic pathways
bde01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BDP_0283 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BDP_0283 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BDP_0283 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bde01011
]
BDP_0283 (ddlA)
Enzymes [BR:
bde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
BDP_0283 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
bde01011
]
Precursor biosynthesis
Amino acid ligase
BDP_0283 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
ADB08963
UniProt:
D2Q827
LinkDB
All DBs
Position
359501..360637
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AA seq
378 aa
AA seq
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MAKKRIVVMYGGKADEHSISCISTAGVLRALDVEKFEAIPVGITKTGQWIVDGEDPRGWN
MSEGMPIVRKTDTAKDVVLDVALGQDGFFAREADGTLTSLGHVDAVLPVLHGPYGEDGTI
QGLFEMMNVPYVGCGVFASAACMDKHYTKVLLAAAGIPVAPGITLDARDCDAACAFAANG
ETMLAAVQAAGLRYPLFVKPSRAGSSFGVTKVEREGDAAELAAAVFEASHHDWRVLVEQG
IDAREIECAVLCPKAGDEPRASWPGEIVLDKRAGGDDQFYDFDSKYMDAEASHVEVPAAL
PQETLELVRETAKKAFKAVDGTGLSRVDTFVTADGKVMVNEINTMPGFTPISMYPKAWDA
TGVSYTDLISTLIEGVLE
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaagcgcattgtggtgatgtatggcggcaaggccgatgagcattcgatttcg
tgcatctccaccgcaggagtgctgcgtgcgctggatgtggagaagttcgaggcgattccg
gtcggcatcaccaaaaccggccagtggatcgtcgacggtgaggatccgcgcggctggaac
atgagcgaaggcatgccaatcgtcaggaaaaccgataccgccaaggacgtggtgcttgac
gtggctctcggccaagacggtttcttcgcgcgtgaggccgacggtacgctgacctccctt
ggccatgtggacgcggtgttgccggtgctgcacggtccgtatggcgaggacggcaccatc
caaggtctgttcgaaatgatgaacgtgccgtacgtgggttgcggtgtgttcgcctccgcc
gcttgcatggacaagcactatacgaaggtgctgctggctgccgccggcattccggtcgcc
cccggcattacgttggatgcacgcgattgcgatgcagcttgcgcatttgccgcaaacggc
gaaacgatgttggccgcggtacaggctgcgggattgcggtatccgctgttcgtcaagccg
tcccgtgccggttccagcttcggcgtgaccaaggtggaacgcgagggtgacgccgccgaa
ctggccgccgccgtattcgaagcatcccaccatgattggcgtgtgctggtcgagcaaggc
atcgacgctcgtgagatcgaatgtgcggtgctgtgcccgaaagccggcgacgaaccgcgt
gccagctggccgggtgagattgtgcttgacaagcgtgccggcggcgacgatcagttctac
gatttcgacagcaaatacatggacgccgaggcgagccatgtggaagtgcctgcggccctg
cctcaggagacgctcgaactggtgcgtgaaaccgcgaagaaggcgttcaaagcggtcgat
ggcacaggcctaagccgtgtggacacgttcgtgacggccgatggcaaggtgatggtcaac
gaaatcaacaccatgccgggcttcacgccgatttccatgtatcccaaggcgtgggacgcc
acaggcgtaagctataccgatctgatctccaccctcatcgaaggcgtgctggagtag
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