Bifidobacterium dentium Bd1: BDP_0343
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Entry
BDP_0343 CDS
T01143
Symbol
dapE
Name
(GenBank) dapE Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde00300
Lysine biosynthesis
bde01100
Metabolic pathways
bde01120
Microbial metabolism in diverse environments
bde01230
Biosynthesis of amino acids
Module
bde_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BDP_0343 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bde01002
]
BDP_0343 (dapE)
Enzymes [BR:
bde01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
BDP_0343 (dapE)
Peptidases and inhibitors [BR:
bde01002
]
Metallo peptidases
Family M20
BDP_0343 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ADB09021
UniProt:
D2Q885
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All DBs
Position
421381..422586
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AA seq
401 aa
AA seq
DB search
MRRMSELEIGFDASAGKQAALNTLMEQIMGSYSVSDDEGPLTDAVETFLTMQPHLTVHRH
GDTLVASTDFGRAQRVILAGHLDTVPVIDNFPPKWLEPGDPLIREDVAAGHEGERVIWGR
GATDMKGSDAVMLYLAATLTDARYDLTYVFYDHEEVAAEKNGLRKVVEAHPDWIAGDFAI
IGEPTDCGIEGGCNGTMRFDVVTHGVAAHSARAWMGENAIHKAAEILNRLNAYENRAVEV
DGLTYQEGLNATLISGGKGTNVIPDECRVHVNYRFAPDKTLAEAKALMIGVGAGAELGNG
EHMATGGVFAGFGIEMKDESPSARPGLNSPLAASLVDLVRDRTGRDPLAKLGWTDVARFA
ILGIPAVNLGAGSPLLAHKHDEQLPESDLVLMADLLEDWLR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcatgagtgaacttgagattggattcgatgcctccgccggcaagcaggccgca
ctgaacacgttgatggaacagatcatgggcagctattccgtcagtgatgacgaaggtccg
ctgaccgatgccgttgagacgttcctgacgatgcaaccgcacctgaccgtgcatcgtcat
ggcgatacgctggtcgcctccacggatttcggtcgtgcgcagcgggtgattctcgcaggt
catctcgacacggtgccggtaatcgacaacttcccgccgaaatggctggaaccgggcgat
ccgctgattcgtgaggatgtcgctgccgggcatgaaggcgaacgcgtgatctggggtcgt
ggagccactgacatgaagggctccgacgccgtgatgctctacctggcagccacgttgacg
gacgccagatatgacctgacgtatgtcttctacgaccatgaggaggtcgcagccgagaag
aacggcctgcgcaaggtggttgaggcgcatcccgactggattgccggcgatttcgccatc
atcggcgaaccgaccgactgcggcatcgaaggcggttgcaacggcaccatgcgtttcgat
gtggtcacgcatggcgtggctgcgcattcggcgcgtgcctggatgggcgagaacgccatc
cacaaggcggctgagatcctgaaccgtctgaacgcatacgagaatcgcgccgtcgaagtg
gatgggttgacttaccaagagggattgaacgccacgttgatctccggtggcaagggaacc
aacgtgattcccgacgaatgccgcgtgcacgtgaactaccggttcgcgcccgataagacg
cttgccgaggcgaaggcgttgatgatcggcgtcggcgcgggtgccgaactcggcaatggc
gagcatatggccaccggcggcgtgtttgcgggcttcggcattgaaatgaaggacgaatcg
ccttcggcgcgaccgggactgaactctccgttggccgcttcgctggtggaccttgtcagg
gatcgcaccggccgcgacccgctcgccaagctcggttggacggatgtggcgcgtttcgcc
atcctaggcattccggccgtaaatctcggtgccggcagtccgctgctcgcccacaagcat
gatgagcagctgccggaatccgatctggtgctgatggccgacctgctcgaggactggctg
cgctga
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