Bifidobacterium dentium Bd1: BDP_1029
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Entry
BDP_1029 CDS
T01143
Name
(GenBank) Pullulanase
KO
K01200
pullulanase [EC:
3.2.1.41
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde00500
Starch and sucrose metabolism
bde01100
Metabolic pathways
bde01110
Biosynthesis of secondary metabolites
Module
bde_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
BDP_1029
Enzymes [BR:
bde01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.41 pullulanase
BDP_1029
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
PUD
CBM_48
Alpha-amylase_C
Big_5
pulA_all-beta
Pullul_strch_C
SpuA_C
DUF928
Motif
Other DBs
NCBI-ProteinID:
ADB09671
UniProt:
D2QA35
LinkDB
All DBs
Position
1159568..1164610
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AA seq
1680 aa
AA seq
DB search
MVAIGVAVAMSCAALVVPTMAQAQSEARTSAKKDVQVIAFQQSWNTIAKECTDTYGPEGV
AYVEVSPPQESIQGTQWWTSYQPVSYRLDSKLGTEAEFKNMIKQCNAAGVDIIADVVINQ
TTGSDVAAGEQKGVAGSDYNGSTGSYPGFATKRYPDGITASDFHSCTKNISDYGNQWEVQ
ECRLSSMWDFDSESEKVQDIQSDYLVSLWNAGVRAFRMDAVKHINTSSMKAIKEKFAQKI
GKNADDIYWIQEVIGNSSEAAGIQPSNYVQNGTVTEFGFKSEMNQAFKDKIANLKGLDER
LSKDLSSEDANVFVTNWDTARNEGALTYKDGAKYQLANAFMLAYDYGTPRLISDYKWSNG
DDGAPGATATSVPDVDMDKVCSTNDSDWNCEQRWTSTRGMIALRNYVNGTEVTDWQDDGG
DNIAFSRGNKGFIAINNGKNDKDASYATSLADGEYCNVYATMDCSKTVTVKGGKVEATVP
AHSAIALYAGSTKDSHPASSATTDPSDPDVSQEEDDALPDDRSVTIYYKPADSSWKTPKV
HYGLGDEWNQPDADMILDAQGYYTATISTKGKKIDFVFHDADTDQWENPKGGGNYSANAG
ITYVGVADQTSTVGNPESIGGQTRLVVHYKPSGDSDNRGVYVWGTDANGAGMSAEHHAFT
GTDCWGKVAVLTFDGKYDKFGFIITTSEWNKYGADRSATVNADGTAEVWIDGTKYQDQGE
STTIETLDSAPSDYACKANAVTVKVHYNRDDGLYYNAEDTSVTVPQWDIWTWASNWNGGA
ATFASHDDWGEVAEYSFTNYTYYNNDGVSDIGMLRRYGKDAWKAKDPDDSDHKIPSDALV
FDADGNASAEVWLMSGDATVYSSRPSLGASVKSAEISDTNQLSAKLSKKVSADDLDGKIS
VTDAGGKSVKIKNVKTDGNKVIVTTDKDLDVRGRYTVEVKDFGSQDAIAGAVVRTDAFDK
KYAYSGDDLGATFQKNQTGFKVWAPTATNVKLVTYRSADPNAEVDKTIDMTGEDKGVWSA
TVKKLASGTAYAYQLTFADGTVNVSADPYATAAVANGERSVVLSQKDMGSAGDRMPAFGK
TTDATIAEMNIRDFSISPDSGIAADRQGKYLGVVQSGTKTAKGATSGLDYLKSLGVSHVQ
IMPMYDYGSVNETGDLSYNAAGAQNWGYDPENYNVPEGSYSSDPSNPSTRVAEMKQMVKE
LHKNDIRVIMDVVYNHVYNAASHSFNKTVPGYYFRYDANGALVNNSGCGNDTASERKMMR
KYIVDSVTYWAKNYNVDGFRFDLMGLIDLETMKEVRAALDKIDPSIIILGEGWDMNTTMD
KSRMTIQPNAYEVASDGKNNGIAFFNDSIRDGIKGSVFSDTDTGFVSGKAGQEGLIAHNA
LGCRYDADADTTCWNGNAQDHYADAGQVVNYAEIHDNMTLYDKLRASVPTDDDATTVARA
KLADSIVYLSEGIPAIQLGQEFLRTKGGNGNSYNTGDAMNAIDWDRTTQYADSVDYVKGL
IKLRKQIKALRLTDYDDIGKDVKLIKSADGVVAYRVKDESGTYVVIFNANADAAKIEGLD
SGSYKTLIADGKVNADAATVTVDKDGSYAAGALSATVLQLDTAKKDGGKADNGKTDNGKT
VPVKPSANKPSSNDAKGASAASAGVAATGTDISGIMLVAVLLAIVSGTVLIVRSGKENSL
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
gtggtggcgattggcgtcgccgtggccatgtcgtgtgccgcgcttgtggtgccgacaatg
gcccaggcccagtctgaagcgcggacgagcgcgaagaaggatgtgcaggtcatcgccttc
cagcaaagctggaacacgattgccaaggaatgcaccgacacctatggacctgaaggcgtg
gcatatgtggaagtgtcgccgccgcaggaatccattcaaggcacacagtggtggacgagt
taccagccggtgagctacagacttgattccaaactcggcaccgaggccgaattcaagaac
atgatcaagcagtgcaacgccgccggcgtagacatcatcgccgatgtcgtaatcaatcag
accaccggttccgacgtcgcagccggagaacagaagggcgtggccggcagtgattacaac
ggctccaccggatcctatccgggcttcgccaccaagcggtatccggacggcatcaccgcc
tccgacttccatagctgcaccaagaacatttccgactacggcaaccagtgggaagttcag
gaatgccgcctgagctccatgtgggatttcgactccgaaagcgagaaggtgcaggacatc
cagtccgattacctggtatcgctgtggaatgccggcgtgcgcgcgttccggatggatgcc
gtcaagcacatcaataccagcagcatgaaggcgatcaaggagaagttcgcgcagaagatc
ggcaagaatgcggatgacatctattggattcaggaagtcatcggcaactcctcagaagcc
gcgggcattcagccaagcaattatgtgcagaacggcaccgtaaccgaattcggcttcaag
tccgagatgaatcaggctttcaaagacaagatcgccaatctcaaaggactggatgaacgg
ctgagcaaggatctttcctccgaagacgccaacgtgttcgtcaccaactgggacaccgca
cgcaacgaaggcgcactgacctataaggacggtgccaagtaccagctggccaacgccttc
atgctggcctacgattacggcaccccacgtctgatctccgattacaagtggagtaacggc
gacgacggtgcgcccggagcgaccgcaacctccgtaccggacgtggacatggacaaggtc
tgctccaccaatgattccgactggaactgcgagcaacgctggacctccacccgcggcatg
atcgccctgcgcaactacgtcaacggcaccgaagtgaccgactggcaggacgacggtggg
gacaacatcgccttctcccgtggcaacaagggcttcatcgccatcaacaacggcaagaac
gacaaggacgcgtcatacgcgacatccctcgcggacggcgaatactgcaacgtgtacgcc
accatggattgctccaagaccgtgaccgtcaagggcggcaaggtggaggctaccgtaccg
gcgcattccgccattgcgttgtatgccggatccaccaaggactcgcacccggcctcctcc
gcgaccaccgatccgtccgatcccgacgtgagccaggaggaagatgacgcactgcccgat
gacaggagcgtcaccatctactacaagcccgccgactccagctggaagaccccgaaggtc
cactacggtctcggcgacgaatggaaccaaccggacgccgatatgatccttgatgcgcaa
ggctattacaccgccaccatcagcaccaaaggcaagaagatcgacttcgtgttccacgac
gcggataccgaccagtgggagaacccgaagggcggaggcaattactccgccaacgcgggc
atcacctatgtgggcgtggccgaccagacctcgaccgtgggcaaccccgaatccatcggc
gggcagacacgtctcgtcgtgcactacaagccctccggagactcggacaatcgcggcgtg
tacgtgtggggcaccgatgcgaacggtgccggcatgagcgccgaacaccacgcattcacc
ggcaccgattgctggggcaaggtcgccgtgctcaccttcgacggcaagtatgacaagttc
ggcttcatcatcaccaccagcgagtggaacaagtatggtgccgaccgcagtgccacggta
aacgccgatggcaccgccgaggtgtggatcgatggcaccaagtaccaggatcagggcgaa
tcaaccaccatcgagaccctggattcggcaccatcggactatgcgtgcaaggccaacgcc
gtcacggtaaaggtccactacaaccgcgacgacggcctgtactacaacgccgaagacacc
agcgtcaccgttccgcagtgggacatctggacctgggcctccaattggaacggcggggcc
gccaccttcgcctctcatgacgattggggagaggtagcggaatattccttcaccaactac
acctactacaacaacgacggcgtttccgatatcggcatgctacgccgttacggcaaggac
gcgtggaaggccaaggatccggatgattccgatcataagatcccctccgacgcactcgtg
ttcgatgccgacggcaatgcctccgccgaggtgtggctgatgagtggcgacgctacggtg
tactcctcacgcccatcccttggggcttccgtgaagtccgccgagatttccgacactaac
cagttgtccgccaaactttccaagaaggtctccgcggacgacttggacggcaagatctcc
gtcacggacgccggcggcaagagcgtcaagatcaagaacgtcaaaaccgacggcaacaag
gtgatcgtcaccaccgacaaggatcttgacgttcgtggcaggtacacggtcgaagtcaag
gacttcggttctcaggacgccatcgccggcgcggtggtccgtacggatgccttcgacaag
aagtacgcctacagcggcgatgacctgggcgcgacgttccagaagaaccagaccggtttc
aaggtgtgggctccgaccgccaccaacgtcaagctcgttacctacaggtccgccgatccg
aatgccgaagtcgacaagaccatcgacatgacgggcgaagacaagggcgtgtggagtgcc
accgtgaagaagctggcctccggcacggcctacgcctaccagctcacctttgcggacggc
acggtgaacgtctccgccgatccgtacgccaccgccgcggtggccaacggcgagcgttcc
gtcgtgctttcccagaaggacatgggttccgcaggcgatcgcatgccggccttcggcaag
accaccgacgccaccatcgccgagatgaacatccgtgacttctcaatcagtccggactcc
ggcatcgccgccgacaggcagggcaagtacctcggtgtcgtgcaatccggcacgaagacc
gccaagggtgcgacttccggcctggactatctgaagtccctgggcgtcagtcacgtgcag
atcatgccgatgtacgactacggttccgtcaacgagaccggtgacctgagctacaacgcc
gccggcgcacagaactggggctacgatccggagaattacaatgtgccggaaggttcgtat
tcctccgatccaagcaatccgagcacacgtgtcgccgaaatgaagcagatggtcaaggaa
ctgcacaagaacgacattcgcgtgatcatggatgtggtctacaaccatgtctataacgcg
gccagccactcgttcaacaagacggttccgggctactacttccggtacgatgccaacggt
gcgctcgtcaacaattccggttgcggcaacgataccgcctccgaacgcaagatgatgcgc
aagtacatcgtcgattcggtgacctactgggccaagaactacaacgtagacggcttccga
ttcgatctcatgggtctgatcgaccttgagacgatgaaggaggtccgtgccgcgctcgac
aagatcgatccatccatcatcatcctcggtgaaggctgggatatgaacaccacgatggat
aagagcaggatgaccatccaaccgaacgcctatgaagtggcctccgatggcaagaacaac
ggtatcgccttcttcaacgattccattcgcgatgggatcaagggttccgtattctccgac
accgacacgggcttcgtctccggcaaggctggacaggaggggctcatcgcgcacaatgcg
ctcggatgccggtatgatgcggatgcggatacgacctgttggaacggcaatgcacaggat
cattacgcggatgccggtcaggtggtcaactacgccgaaatccatgacaacatgaccctg
tatgacaagctgcgcgcctcggtcccgacggatgacgatgccaccaccgtggcccgtgcc
aagctcgccgattccatcgtgtacctgtcggaaggcatcccggccatccagctcggtcag
gaatttctgcgcaccaaaggcggcaacggcaacagctacaacaccggtgacgccatgaat
gccatcgattgggaccgtaccacgcagtatgccgactccgtcgactacgtcaagggtctg
atcaaactgcgcaagcagatcaaggcgctacggctgaccgactacgatgatatcggcaag
gatgtcaaactgatcaagtccgccgacggcgtggtggcctatcgggtcaaggacgagagc
ggcacgtacgtggtgatcttcaacgccaatgccgatgccgccaagatcgaaggccttgat
tccggctcctacaaaacgctgatcgccgatggcaaggtgaatgccgatgccgccaccgtg
accgtggacaaggacggttcgtatgccgccggcgcgttgtctgccaccgtgttgcagctt
gacacggcgaagaaggacggcggcaaggccgacaatggcaagactgacaatggcaagacc
gtcccggtcaagccatccgccaacaagccgtcttccaacgacgcgaagggcgcatcggcc
gcatcggccggagtcgccgcgaccggcaccgacatatccggcatcatgctggtggcggtg
ttgctggccatcgtttccggaaccgtgctgatcgtgagaagcggaaaggagaacagccta
tag
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