Bradyrhizobium daqingense: LPJ38_06425
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Entry
LPJ38_06425 CDS
T07756
Name
(GenBank) helicase
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
bdg
Bradyrhizobium daqingense
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
bdg03029
]
LPJ38_06425
Enzymes [BR:
bdg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LPJ38_06425
Mitochondrial biogenesis [BR:
bdg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LPJ38_06425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
UFS90413
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All DBs
Position
1401233..1404694
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AA seq
1153 aa
AA seq
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MAFSPSPFASERALHDRVPGAGVTAVLGPTNTGKTHLAIERMLAHPSGVIGLPLRLLARE
VYNKIADRAGPESVALVTGEEKIKPRNPRYWVSTVEAMPRDLDVSFLAVDEVQIASDLER
GHVFTDRILNRRGRDETLLLGAATMRPIIERLLPGVSMITRPRLSQLEFAGDRKITRQPR
RTAIVAFSADEVYAIAELIRRQHGGAAVVLGSLSPRTRNAQVAMFQNGDVDYLVATDAVG
MGLNLDVDHVAFASDRKFDGYQFRRLTPSEFAQIAGRAGRATRNGTFGTTGRCAPFEPEL
VNALQNHTFDPVKVLQWRNAKLDFSSLGALQVSLNLAPGHEALTRAPIAEDMRVLDHAAR
DGEVRDVAHGKEAVERLWDACQIPDYRKLSPAAHAELVTTLYGFLMRKGCIPDSWFEAQI
TQADRIDGDIDTLSARIAQIRTWTFVANRPDWLKGPERWQGIAREVENKLSDALHERLTE
RFVDRRTSVLMRRLRENTSLNTEIGKTGEVIVEGHVIGRLDGFTFAPDTAEAGSDAKALQ
AAAQAVLAGEINARAEKLGNAPDEQFVLTSEGIIRWTGDAVARLSAAEEALHPRIRIISD
ERLTGAPRDKVQARLELWLKTHIEKLLGPMFELSKAEDVTGIARGIAYQLVEALGVLERP
KIANELKDLDQPSRAVLRKYGVRFGAYHIYFPGLLKPAARALAALLWALKQDNVDLSSLS
GAQHLASSGRTSFPVDKALPRDAYRVLGYKQAGERAVRVDILERLADLIRPALAWRENSP
GEKPAGAFDGRSFVVTQAMTSLTGSAGEDFASVLRALGYRMEKRPPLPPKPVVAEQVVTE
QVVTETIAAETPPVEGSAETSTETAAEAVAGLPEEPSTEAAAEAVTVEDAPGMEPQDEAA
PAEPAVEASSEAPVTPEDAPGIAPPAEEAAASAEPASLEAAAAETAAIEAAASPDAAAPE
AVATEAAATPAEPELVEVWRPGGRHEDRKPRHERHRHQRHQNQRPQAGAEAAAAASAAPG
EAADGEKRGERHRHGGHRKDFRKGREGGGEGAPRPEGRDDRNRRFEGKDRDNKDRDRNRD
NKGKFGGDRDKGREHRGGRDRDKGRDRRDRESGPSLRPYASSANPRERDRPADPNSPFAK
LAALKEQLSGRKE
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggctttctctccctcccccttcgcttccgagcgcgcccttcacgatcgagtgcctggc
gccggcgtcactgcggtgctcgggccgaccaacaccggcaagacccatctcgccatcgag
cggatgctcgcgcatccctccggcgtgatcggcctgccgctgcgcctgctcgcgcgcgag
gtctacaacaagatcgccgatcgcgcggggccagagagcgtcgcgctcgtcaccggcgag
gagaagatcaagccgagaaatccgcgctattgggtctcgaccgtcgaggcgatgccgcgc
gacctcgacgtctccttcctcgccgtcgacgaggtgcagatcgcctctgatctcgaacgc
ggtcatgtcttcaccgaccgcatcctcaatcgccgcggccgcgacgagacgctgctgctt
ggcgccgccacgatgcgcccgatcatcgagcgcctgttgccgggcgtgtccatgatcacg
cggccgcgcctgtcgcagctggaatttgccggcgaccgcaagatcacgcgccagccgcgc
cgcaccgccatcgtcgcgttctccgccgacgaggtctacgccatcgccgagctgatccgc
cgccagcacggcggcgctgccgtggtgctgggctcgctcagccctcgcacacgcaatgcg
caggtcgcgatgttccagaacggcgacgtcgattatctcgtcgccaccgatgccgtcggc
atgggcctcaatctcgacgtcgatcacgtcgccttcgcctccgaccgcaagttcgacggc
tatcagttccgccgcctcacgccgtccgaattcgcgcagatcgccggccgcgccggccgc
gccacgcgcaacggcaccttcggcaccaccggccgctgcgcgccgttcgagcccgagctc
gtcaacgcgctgcagaaccacaccttcgatcccgtgaaggttttgcaatggcgcaacgcg
aagctggatttctcctcgctcggcgcgctccaggtctcgctgaacctcgcccccggccat
gaggcgctgacgcgcgcgcccatcgccgaggacatgcgcgtgctcgaccacgccgcccgc
gacggcgaggtgcgcgatgtcgcgcatggcaaagaggcggtggaacggctgtgggacgcc
tgccagatcccggattaccggaagctgtcgccggccgcccatgccgagctggtgacgacg
ctctacggcttcctgatgcggaagggatgcatccccgattcctggttcgaggcccagatc
acccaggccgaccgcatcgacggcgacatcgacacgctgtcggcccggatcgcgcagatc
cgcacctggaccttcgtcgccaaccgcccggactggctgaaaggccccgaacgctggcag
gggatcgcgcgggaggtcgaaaataaattatcggatgcgctccatgaacgcttgactgag
cgtttcgttgatcgccggaccagtgtattgatgcgccgcctgcgggagaacacgagcttg
aatactgaaatcggcaagaccggcgaagtcatcgtcgaaggccatgtcatcggccgcctc
gacggcttcacctttgcacctgacacggcggaggccggctcggatgcgaaggccttgcag
gctgcagcgcaagcggtgctcgccggcgagatcaatgcgcgcgccgagaagctcggcaat
gcgccggacgagcagttcgtgctgacctcggaaggcatcatccgctggaccggcgatgcc
gtggcgcggctgtctgccgcggaggaggcgctgcatccgcgcatccgcatcatctccgac
gagcggctgaccggagccccgcgcgacaaagtgcaggcgcggctcgagctctggctcaag
acgcatatcgagaagctgctcgggccgatgttcgagctgtcgaaggccgaggatgtcacc
ggcatcgcccgcggcatcgcctatcagctggtcgaggcgctcggcgtgctcgagcgcccg
aagatcgccaacgagctgaaggatctcgaccagccttcgcgcgcggtattgcgcaaatac
ggcgtgcgcttcggcgcctatcacatctatttccccggcctgctcaagcccgccgcgcgt
gcgctggccgcgctcttgtgggcgctgaagcaggacaatgtcgatctgtcctcgctgtcg
ggcgcgcagcatctggcctcgtcgggccgcacctcgttcccggtcgacaaggcgctgccg
cgcgatgcctatcgcgtgctcggctacaagcaggccggcgaacgcgccgtgcgcgtcgac
attctggagcgcctggccgatctgatccgcccggcgctggcctggcgcgagaactcgccc
ggcgaaaagcccgccggcgcattcgacggccgcagcttcgtggtgacccaggcgatgacc
tcgctcaccggttctgccggcgaagacttcgcctccgtcttgcgcgcgctcggctatcgc
atggagaagcgtccgccgctgccgccgaagcccgtcgtggccgagcaggtcgtgactgag
caagtcgtgactgagacgatcgcggcagagacgccgccggttgaaggcagcgcggagacg
tcgaccgagaccgcggcagaggccgttgccggcctgccggaggagccgtccaccgaggcg
gccgcggaagccgtcaccgtcgaagacgcgcccggcatggagccgcaggacgaagccgcg
cccgccgagccagcggtggaagcgtcgtccgaggcgcccgtcacgcccgaggatgccccc
ggcatcgcgccgcctgccgaagaggctgctgcgtcggccgagcctgccagcctcgaagcc
gctgctgctgaaacagccgcgatcgaagcagctgcatcgcccgacgcggccgcaccggaa
gctgtggcgacggaggctgcggcaacgccggcagagcccgagctggtcgaagtctggcgc
cccggcggccgtcacgaggaccgcaagccgcgccacgagcgccatcgccaccagcgtcat
caaaatcagcgcccgcaggccggagcagaagctgccgctgcggcgagcgccgcgcccggc
gaagccgccgatggcgaaaagcgcggggagcgccatcgtcatggcggtcatcgcaaagat
ttccgtaaaggccgcgaaggtggtggagagggcgcgccgcgtcccgaaggccgcgacgac
aggaatcgccgtttcgagggcaaggatcgcgacaacaaggatcgcgatcgcaaccgcgac
aacaagggcaagtttggcggcgatcgcgacaagggtcgcgagcaccgcggtggccgcgac
cgcgacaagggccgcgatcgccgcgatcgcgagtccgggccctcgctgcgtccctacgcc
tcgagcgcgaacccgcgcgagcgcgatcgtcccgccgatccgaactcccctttcgccaag
cttgccgcgctgaaggagcagctctcggggcgcaaggagtag
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