Bradyrhizobium daqingense: LPJ38_12125
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Entry
LPJ38_12125 CDS
T07756
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
bdg
Bradyrhizobium daqingense
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bdg01002
]
LPJ38_12125
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bdg01011
]
LPJ38_12125
Peptidases and inhibitors [BR:
bdg01002
]
Cysteine peptidases
Family C82
LPJ38_12125
Peptidoglycan biosynthesis and degradation proteins [BR:
bdg01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LPJ38_12125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UFS91434
LinkDB
All DBs
Position
complement(2534049..2536232)
Genome browser
AA seq
727 aa
AA seq
DB search
MRDCLNHRAGFDRVLMTVAATFLTVSASSALAQDQGRSSAAELAIEAAIPRPEPANVPPP
TASDIKLDTTATLQDATKEPAKAEAAPAKVEPKPADVATTPATEAPKSETAKTEPAKSEP
AKAEPAKADTATAPAVPAAAPAAEPVKAASNVPAADQPVADKLKDIIGAKTSRHFDRKNE
RAAIEKFYGARDFAPVWTQGGSLTAAAKGVIARLKDAASDGLNPADYPVPDFAAATTPDA
LADAELKLTASMFDYARQAQSGRMHWSQASGDILYPEHPVDPNEVLAKVTTATDASAALD
SYNPPHKLYKELKAKLAELRGQGSGPAIEIADGPALKYTPAGKKQAEIIVEDPRVPQLRA
KLGITENANDTRYDAAVAEAVRKFQSGAEMKATGILDDKTVKALNTPKRDKQIDVVLVNM
ERWRWLPRDLGAPAIGDAYVILNIPDFTLKVMQRGQQVWTTRVVTGKPGKHATPLLTETM
KYITVNPTWNVPPSIVYNEYLPALQQDPTVLQRMGLRLEQNRDGSVHISQPPGEANALGR
IRFNFPNKFLVYQHDTPDKHLFAKEERAFSHGCMRVQNPDQYASVLLNIVMPNEKYTPER
IRSMYGKSEIDLKFPTPIPVNITYQTAFVDDAGKLQFRKDIYGRDAVMINILKNSRGKDI
ENVVAHSQPSYSRPATTLPSGVAVANNGGGFGSSGPNFFERLFGAGPPTPPPAPVGRRPA
QQRVFTR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgactgtttgaaccaccgtgcaggcttcgaccgcgtcttgatgacggtcgcggcg
accttcctcacggtgtctgccagctcagccctggcgcaggatcaggggcgcagcagcgcc
gccgagctcgcgatcgaagccgcgatcccgcgtcccgagccggccaacgtcccgcccccg
accgcatcggacatcaagctcgacaccaccgcgacgctgcaggacgcaaccaaggaacct
gcgaaggctgaagccgcacccgccaaggtcgagccgaagcctgccgacgtcgcgacgacg
cccgccaccgaggcgccgaagagcgagacggcaaaaaccgagcctgcgaaatctgagccc
gccaaggccgaacccgccaaggccgataccgcgaccgccccagcagtgcccgctgcggct
ccggccgccgagcccgtcaaggccgcgagcaacgttcccgctgccgaccagccggtcgcc
gacaagctcaaggacatcatcggcgccaagacctcgcgccatttcgaccgcaagaacgag
cgggccgcgatcgagaaattctacggcgcgcgcgacttcgcgccggtctggacccaaggc
ggcagcctcaccgccgcggccaagggcgtgattgcgcgactgaaggatgccgcctccgac
ggcctcaatccggccgattatccggtgcccgatttcgcagccgccaccacgcccgatgcg
ctcgccgatgccgagctcaagctcaccgccagcatgttcgactatgcgcgccaggcccag
agcggccgcatgcactggtcgcaggccagcggcgacatcctctatcccgagcatcctgtc
gatccgaacgaggtgctcgccaaggtcacgaccgcaacggatgcgtccgctgcgctcgac
agctacaacccgccccacaagctctacaaggagctgaaggccaagctcgccgagctccgc
ggtcagggcagcggcccggccatcgagatcgccgacggtccggcgctgaaatacaccccg
gccggcaagaagcaggccgagatcatcgtggaagatccgcgcgtgccgcagctgcgcgcc
aagctcggcatcaccgagaacgcgaacgacacccgctacgacgcggcggtcgccgaagcc
gtgcgcaaattccagagcggcgccgagatgaaggcgaccggcatccttgacgacaagacc
gtcaaggcgctcaacacgcccaagcgcgacaagcagatcgacgtggtgctggtcaacatg
gagcgctggcgctggctgccgcgcgacctcggcgcaccggcgatcggcgatgcctatgtc
atcctcaacattcccgatttcaccttgaaggtgatgcagcgtgggcagcaggtctggacc
acacgcgtcgtcaccggcaagccgggcaagcacgccaccccgcttctcaccgagacgatg
aagtacatcacggtcaatccgacctggaacgtgccgccgtcgatcgtctacaacgagtat
ttgccggcgctgcagcaggatccgaccgtgctccagcgcatgggcctgaggctcgagcaa
aaccgcgacggctcggtgcacatctcgcagccacctggcgaagccaacgcgctcggccgc
atccgcttcaacttcccgaacaagttcctggtctatcaacacgacacgccggacaagcac
ttgttcgccaaggaagagcgcgcgttcagccatggctgcatgcgcgtgcagaatccggat
cagtacgcctccgtgctgctcaacatcgtcatgcccaacgagaaatacacgccggagcgc
atccgcagcatgtacggcaagagcgagatcgacctgaaattcccgacgccgatcccggtc
aacatcacctatcagaccgcgttcgtggatgacgccggcaagctgcaattccgcaaggac
atctatggtcgcgacgcggtcatgatcaacattctgaagaacagccgcggcaaggacatc
gagaacgtggtcgcgcattcgcagccgagctattcccgcccggcgacgacactgccgtca
ggcgtggcggtggccaacaatggcggcggtttcggctcgtccggcccgaatttcttcgag
cggctgttcggggcggggccgccgaccccgccgccggcgcccgtcggccgccggccggcg
cagcagcgggtgttcacccgctaa
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