KEGG   Brachypodium distachyon (stiff brome): 100820960
Entry
100820960         CDS       T01717                                 
Name
(RefSeq) splicing factor U2af large subunit A isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100820960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bdi03041]
    100820960
Spliceosome [BR:bdi03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100820960
 Complex B
    100820960
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded DUF4154
Other DBs
NCBI-GeneID: 100820960
NCBI-ProteinID: XP_003578657
UniProt: I1ISV7
LinkDB
Position
4:complement(42970735..42975212)
AA seq 534 aa
MAEYDEPSEGTAATGRYLSSDARSQHDEQPHKERSSKSRERDREREEGKDRERDRDRGRE
RARYGDREMGYEHGDRNRDRDRHHQEHRERSERREHRGRSDDHDYRRSRNHESERRERDR
DGHRRQRSRSRSRSRAQSKRVSGFDQGPSQTISIAAPSVTPGLLPAVPAAIPAMLPNMFN
IPIAGQPQAMTQQATRHARRVYVGGLPPSANEQTVAIYFNHVMAAIGGNAAGLGDAVVNV
YINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSQAAVLGPSQPNPNL
NLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVQELLETFGPLRGFDIVKDRETGNSK
GYAFCVYQDLAVTDIACAALNGIQLGDRTLTVRRANQGAAEPRPEHENILLQAQHQAQMK
KLVYEVGGAIPTKVVCLTQVVSEDDLRNDEEYKDILEDMTFEGRKYGNLVQAVIPRPHPN
GVPVAGVGKVFLEYADVDGSTNAKAGMHGRRFDGKVVDAVFYPEKKFADGEYDG
NT seq 1605 nt   +upstreamnt  +downstreamnt
atggcagagtacgatgaaccctccgagggcaccgccgccaccgggaggtatctgtccagc
gacgcccgctcccagcatgatgaacagcctcacaaggaaaggtcctcaaaatctagagag
agggatagagaacgagaggagggcaaagacagggagcgtgacagagaccgtgggagagag
agagcaaggtacggggacagggagatgggctatgagcatggtgaccggaacagggatcgt
gatcgccaccatcaggagcatcgtgaaagaagtgaaagaagggagcaccgtggtcgctct
gatgatcatgattatcgtcggagccgtaatcatgagtctgaaagaagagagcgtgataga
gatggccatcgcaggcaacggtcccgctcccgctcccgttcaagggctcaaagcaagcgt
gtgagtggatttgatcagggaccatcacaaaccatttctatagctgctcccagtgtaacc
ccaggtctgctacctgcagttcctgctgctattcctgcgatgcttccaaacatgtttaat
atacccatagcaggacagccgcaagcaatgacacaacaggctactcggcatgctcggcgt
gtttatgtcggtggacttcctccaagcgctaatgaacagacggttgctatatacttcaat
catgttatggctgctattggaggaaacgcagctggtctaggtgatgcagttgttaatgta
tacataaaccatgacaagaaatttgcatttgttgagatgaggtctgtggaggaagctagc
aatgcaatggccttggatggtatattgtttgagggagcaccagtgaaggttaggaggcca
acagactacaatccttcccaggcagctgtgttaggtccaagccagccaaaccccaatctc
aatcttgctgctgttggtttgacacctggctcagccggaggtttagaaggtcctgaccgc
atttttgttggcggtctgccctattatttcacagaggctcaagtgcaggagttgcttgaa
acttttgggccccttcgtggatttgatattgtgaaggatagggaaactggcaactcgaag
ggctatgccttctgtgtataccaggatctggctgtcaccgacattgcatgtgctgctctt
aacggtatccagttgggagaccggactctcacagttaggcgagcaaaccaaggagctgct
gaacctaggccagagcatgaaaacatactgttgcaggcacagcatcaggcacaaatgaag
aaacttgtgtacgaagttggtggagccataccgacaaaggtggtatgcttgacccaggtg
gtttcagaagatgacttgagaaatgatgaggaatacaaagacatcttggaagacatgact
tttgaagggcgcaaatatggtaacttggtgcaagccgtgatcccacgaccccatcccaat
ggtgttcctgttgctggagttggcaaggtgtttttggagtatgcagatgtggatggctcg
accaacgcgaaggcagggatgcatgggaggaggtttgacgggaaggtggtggatgctgtc
ttctaccccgagaagaagtttgctgatggagagtacgacggataa

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