KEGG   Brachypodium distachyon (stiff brome): 100821343
Entry
100821343         CDS       T01717                                 
Name
(RefSeq) splicing factor U2af large subunit A isoform X2
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100821343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bdi03041]
    100821343
Spliceosome [BR:bdi03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100821343
 Complex B
    100821343
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 100821343
NCBI-ProteinID: XP_003577312
UniProt: I1IK06
LinkDB
Position
4:12305136..12310982
AA seq 576 aa
MADYEERYEGNGDPADPAGAIAGGSPPPPPTKPTGFSDHPDDDGRSQEVQPHEGRSSKSR
ERDRGRDKDKDRERDRDHGRDRERGRDKDRDRGDRERDRHHREHRERSEKREHRERSEKR
EHRGRSDDHDRHQSRDRDVERRDRDRDGHRRHRSRSRSKGRDRRSRSRSRSKSKRVSGFD
QGPSQGVPLVTPGATPGQLPAVAPLIPGMLPNMFNFTAPTQFNPLAMQPQAMTQQATRHA
RRVYVGGLPPTANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEE
ASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGP
DRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACA
ALNGIKMGDKTLTVRRANQGASQPRPEQETILMQAHQQVQMQRLVLQVGGALPTKVVCLT
QVVSADELRDDEEYEDILEDMREEGRKYGNLVKAVIPRPDPSGAPVPGVGKVFLEYLDVD
GSTKAKTGMHGRKFGGNQVVAVFYPENKFAEGDYDA
NT seq 1731 nt   +upstreamnt  +downstreamnt
atggccgattacgaggagcgctacgagggaaacggcgaccccgctgaccccgccggcgcc
atcgccgggggttcacccccacccccgccgaccaagcccaccgggttctccgaccacccc
gacgacgacggccgttcccaggaggtacagccacacgagggaaggtcctctaaatctaga
gagagggacagaggacgagacaaggacaaggatagggagcgtgacagagaccatggtaga
gatagagaaaggggtcgggacaaggacagggatcggggtgacagggaacgtgaccgccac
catagggaacaccgtgaaagaagtgaaaaaagggagcaccgcgagagaagtgaaaaaagg
gagcaccgtggtcgttctgatgatcatgatcgccatcagagccgcgaccgtgatgttgaa
agaagggaccgtgatagagatggccatcgcaggcatcgctcgcgctcccgttcaaagggt
cgtgaccgcagatctcgttcacgctctcgttcaaagagcaagcgcgtgagcggatttgac
cagggaccatcacaaggcgttccgttagttactcctggtgcgaccccaggtcagctacct
gcagttgcccccctcattcctgggatgcttccgaacatgtttaatttcaccgcacctacg
cagttcaaccctcttgctatgcagccacaggccatgacacaacaggctactcggcatgct
cggcgtgtatatgttggtggacttcctccaactgctaatgaacagaccgttgctatatac
ttcaatcaagttatggctgctattggaggaaacacagctggtcctggtgatgctgttctt
aatgtatacataaaccatgacaagaaatttgcttttgtggagatgaggtctgtggaggaa
gcaagcaacgcaatggccttggatggtataatgtttgagggagcaccagtgaaagttaga
aggccaactgactacaatccttccttggcagctgcactgggcccaagccagccaaaccct
aatctcaaccttggtgctgttggcttaacacctggttcagctggaggtttagaagggcct
gaccgcatttttgtgggtggcctcccctattacttcactgaggctcaagtgcgtgagttg
cttgaatcctttggaccactgcgaggatttgatcttgtcaaggatagggagactggcaac
tcgaagggatatgcattctgtgtgtaccaggatcttaatgtcactgacattgcctgtgct
gccctcaatggtatcaagatgggagacaagaccctcactgttaggcgagcaaaccaaggt
gcttctcaaccaaggccagagcaagaaaccatcctgatgcaggcacatcaacaggtgcag
atgcagagactcgtgctccaagttgggggagccctaccaacaaaggtggtatgccttacc
caggtggtttcagcagatgaactgagagatgacgaggagtacgaagacattttggaagat
atgagggaagaagggcgcaaatacggtaacttggtgaaagctgtgatcccacgacctgac
cccagtggcgctcctgttcctggagttgggaaagtgtttttggaatatttagatgttgat
ggctcgaccaaggcgaagaccgggatgcatggaaggaagttcggcgggaaccaggtggtt
gctgtgttctaccctgagaacaagtttgcagagggagactatgatgcttag

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