Brachypodium distachyon (stiff brome): 100821735
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Entry
100821735 CDS
T01717
Name
(RefSeq) protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100821735
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
100821735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
100821735
NCBI-ProteinID:
XP_003575794
UniProt:
I1IHW2
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All DBs
Position
4:complement(4849345..4852111)
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AA seq
658 aa
AA seq
DB search
MPDPNLDDLLLQAAGRTVGKGSQSRPSNQRWQQRGRRAGGPYSGGSGSDDGDSDSDAAPS
YPRKRQPSGSQVPLKKRHQTEKGGGGGGYDDDGDLDDEARRCGGEDSDSAPSVGSDLYKD
EDDKEQLENMTELQREMILAERSTRIDEYKLKKKLARTATTSKTEARKDSPPPPLSRSRS
STRTDRSATKSALDELRAKRMRQQDPEGYRNRFKDLVTKTGSPTRRRAGSPPSDGSNDGD
NRGRMNDHGGIADDAREDEFDESPSRLVPLKFDDVKSITLRRTKLVKWFMEPFFEDLVSG
CFVRIGIGKTKSGPKYRLCIVRNVDASDPDRQYKLDSYTTCKYLNVVWDNEANAARWQMT
QVSDSPVLEEEFKEWLQEAEKNGVRIPTRQEVLEKKEAIQKAYTFVYSAATVKQMLREKK
SAVRRPMNVAAEKDRLRDQLEMALVRRDEVEAERIRARLNQLQKIAQPMSNNEKAAKLEE
MNRKNRAENFKTASEMKAVNTSLKAGEAGYDPFSRRWTRSRNYYAAKPEGEAEGDNAEAA
NGNGDSAIASTKDVKGAVQVGSTVTASALVAAAEAGKLVDTNAPLDLGTETNSLHNFELP
ISLSVLEEYGGPKGLFEGYMARKQKIEATMGYKIPDNDGRRHALTLSVSDYKRRRGLL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgccggatcctaacctggacgatctgctcctgcaggccgcggggcggaccgtgggcaag
ggaagccagtcccggccgtcgaaccagcgctggcagcagcgcgggcgccgcgcggggggc
ccctactccggcgggagcggctccgacgacggcgactccgactcggacgccgcgccgagc
tacccgaggaagaggcaaccgtcggggtcgcaggtgccgctcaaaaagcgccaccagacg
gagaagggcggcggcggcggagggtacgacgacgacggcgacctcgatgacgaggcgagg
cggtgcgggggtgaggactccgacagcgcgccgtccgtcgggagcgacctgtacaaggac
gaggacgacaaggagcagctggagaacatgactgagctgcagagggagatgatcctggcc
gagcggagcaccaggatcgacgaatacaagctcaagaagaagctggcgcggactgccacc
acctccaagacggaggcacgcaaggacagccctcccccgccgctcagcaggtcgcggtcc
tccaccaggaccgacaggtccgccaccaagagcgcccttgacgagcttcgggccaagcgg
atgaggcagcaggatccggaggggtaccgcaacaggttcaaggatttggttaccaagacc
ggctcaccaaccaggcgtagagctggaagccccccgagtgatggtagcaatgatggagac
aatagagggaggatgaatgaccatgggggtattgctgatgatgcccgggaggatgagttt
gatgaatcgccgagtaggctcgtccctctcaagttcgatgacgtcaagagtataaccctt
aggaggacaaagctggtgaaatggttcatggagcccttctttgaggacctcgtatctggg
tgctttgtgcggattgggattgggaagacaaaatcaggccccaagtacaggctgtgcatc
gttaggaatgtggacgccagcgacccagataggcaatacaagctggatagctacacaaca
tgcaagtatctcaatgttgtatgggataatgaagctaatgctgctcggtggcagatgact
caggtgtctgactcccctgttcttgaagaagagttcaaggagtggctgcaagaggctgaa
aagaatggtgtgcgcataccaacccggcaggaagtgcttgagaaaaaagaggccattcaa
aaggcatatacatttgtgtattcagcggctactgtaaagcagatgctgcgtgagaagaaa
tcagctgtgagacgtccaatgaatgttgctgctgagaaggataggctgagggatcagttg
gagatggccctggttcggagggatgaagtagaagcagaaaggatccgtgcaaggctgaat
cagctgcagaagattgctcaaccaatgtcaaacaatgagaaggcagcaaagttggaggag
atgaacaggaagaatcgtgctgagaacttcaagactgcatcagaaatgaaggctgtcaat
acaagtctgaaggctggagaggctggttatgatcctttttcaaggaggtggacaagatcg
agaaactattatgcggcaaagcccgaaggagaagcagaaggagataatgctgaagctgcc
aatggaaatggtgatagtgcaattgctagcaccaaagatgtgaagggcgctgtgcaagtt
ggatcgacagtcacagcttcagctctagttgcagcagctgaagctgggaaactagttgat
accaatgcacctttggatctcgggacagaaacaaattcactccataattttgagcttccc
atatcattatctgttctggaagagtatggcgggcccaaaggtctgttcgaaggctacatg
gcaaggaagcagaagatagaagcaacgatggggtacaagatccctgacaacgacggaagg
aggcatgctttaactctatcggtgagcgactacaaaaggcgacggggtctcctctaa
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