Brachypodium distachyon (stiff brome): 100823183
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Entry
100823183 CDS
T01717
Name
(RefSeq) uncharacterized protein LOC100823183 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100823183
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100823183
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100823183
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-rbx1
zf-RING_10
zf-RING_6
Prok-RING_4
zinc-ribbons_6
zf-ANAPC11
zf-Nse
Sina_RING
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
100823183
NCBI-ProteinID:
XP_014755854
UniProt:
A0A0Q3M9S6
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Position
3:complement(54134408..54137471)
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AA seq
320 aa
AA seq
DB search
MPCQCNLSLPIQRQPQPSSPPTSPPTAFAPPRRSRALPAPANAAATRAACLNWEVVLFIG
GEAREPPRLLTPATSPDLRIEPHPPPRAPPFGPSNRSWRRREASCRGGRRGREEVDSDSM
STVAGAQSASRGQSQDGSADKVVVNLDGSSSVAGNRRGVSTSTGSRASPIDVEALHDELQ
IILPSQVPPLRWNRRSRMQLNTYIDLEVDADWEGNKRQRPTERGEGSSLQSNNVVETKEE
PVKVAPKEPTYTCPVCWGELVEPSSTICGHIFCTDCIKQSLEFQKKCPTCRKILRKNNFH
RIYLPNSHVEGPSEACRREL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgccatgccagtgcaacctctccctcccgatccaacgccaacctcagccgtcgtctccg
cctacaagcccacccactgccttcgcccccccccgccggtcacgcgcgctgcctgcccct
gccaacgctgcggccacgcgcgccgcctgcctcaactgggaggtcgtgctgttcatcggc
ggcgaggcccgtgagccaccacggttgctaactccagcaacctcccccgaccttcggatt
gagccccatcctcccccgagggcgccccccttcggaccgagcaacaggtcttggcggcgg
cgggaggcaagctgcagaggtgggagacggggaagggaagaggttgattctgatagcatg
agtactgtcgccggtgcacagagcgcctcaagggggcaatcacaagatggatctgctgat
aaagttgttgtgaacttggatggaagctcatcagtggcggggaaccgtcgtggggtgtca
acctccactggttcacgcgcatcacctattgatgtcgaagctctccacgatgaactgcag
ataatattgccttcacaagtgcctcccctgaggtggaatcggagaagtagaatgcaactt
aacacatacattgatctggaggtagatgctgactgggaagggaacaaacgccaaaggcct
acagaaaggggagaggggtccagcctgcagtcaaacaatgtggtggaaactaaggaagag
cctgttaaggtggctccaaaggaaccaacttatacttgtccggtgtgctggggcgagttg
gtggagccatcatcaactatctgtggccatatcttctgcaccgattgcatcaagcaatcc
ctcgagtttcagaagaaatgccctacatgccgcaagatactgagaaagaacaattttcat
cgtatttaccttccaaactctcatgttgaaggtccatcggaagcgtgccgaagggaattg
tag
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