Brachypodium distachyon (stiff brome): 100824679
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Entry
100824679 CDS
T01717
Name
(RefSeq) uncharacterized protein LOC100824679 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100824679
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100824679
Surveillance factors
Other surveillance factors
100824679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
100824679
NCBI-ProteinID:
XP_003567419
UniProt:
I1HUR1
LinkDB
All DBs
Position
2:complement(56802804..56809636)
Genome browser
AA seq
1533 aa
AA seq
DB search
MAERKLDRFAALGKDGLSLGIEEDRNTAAAMGFVEESKDQQHLENSIPLSPQWLYAKPND
TKISAPHGSLLEPAEKDARMLEGTKERRRNAFDTDSSLRWLDEERETSLLGRRERKKEVD
RDVENRKNDRRSDNVTARDNNDSRAPPTSERWNDGSTRNSGNEGRRDGKWSLRWGPDDKE
KESRPEKKIDAEKDETHGEKQTFPGRLLPESDSRDKWRPRHRQETQPVGTATYRAAPGFG
LEKGRVKDSNVGFSPGRGRGNPNSVPSFSRPSSAGPIGAPPVHGRRVTTAGAFRYPRGKL
LDIYRQQKIVPSFDGGHRTLEDIPSITLPTSVQPLAFVTPDTDEEAVLEDIRKGRVIGSE
VTNTTALQKERKQDTEARGTDDKDKGTEAFSGLGHEGSAALITEKDAFYNEGMFAGGIPD
PLKKHIEDNFPSNHIELSSTKSSADIDLGAKLPDDPNSHLNVNIDTTGQASYTDGKASGL
ASYPEELTLYYLDPQGGVQGPFMGTDIISWYEDGYFGLELPVRLSQAPDEAPFRPLSELM
PYLGHKPQPLPPVSRGESAESMDSVHNNFEDALPTSGSFGKNDQTSKGDSESYGVNPKRG
DNEASLQSRNNSWFLLPEPEKAEVKPDVRQQHIPETVSQDAEEVLYTGRPNSSMGQSRQD
FDNDRADIHLASLDSRSGVGEANLPHHDAPRENELSPLGLLWSELEGMHPKQPLSSNVLG
VNERRNPKATAPKDIPPLNSRHGQLSRMNEAPVVRDDWPASLGRMDSMNDANISGLIPQV
EPELGHLNFEEQMLLTQIRREQLQQEHLMARNSLEFPGPFAGQVFDSLHQHRQSINPPVP
EVEHLLRIQFELEQQQQRRQQLQQEQHRQQLQQEQHQRQLQQEQHQRQLQQRQAQLLQQQ
QQQQQQLIIEQMLQQQLQGSNFGPGNMVDQVLLREQLLNDLHHQPHHFQRQHDAAIEQLI
QAKFGHGHHREQQNDMLDVLSRSNQRQGLPLEQQILLGLHHDQLQSQQMANAIRQHAGRE
DERHLSGVWPMEDPNQFIRPGTSPNQSHINRLGQFELLQSLQRSSSVEHHDHLDRSLSLH
ERLHRGGQGIHSLERSGSLPGGAPLPNPDVVNALARHHGLGQLENQGDLYSLGQMPMHAS
GVHPQQHRLQEQVSGSHMGRLERNWSDANGQLQNSLIEASRISQLQIEAEKHRRNVEMNL
PIDNPHAWASLMNNDRNTEPDLSDMFHQKLALQSHQSRGFTDVPLTAAFGRKDPSLLFAQ
PPADNSLRSPVDRLSFDDPLAERSQFAKMGHLGQQEGSTTLDSLPNNIEMSRKLGLRSSS
GTMLDIQRGEFPDVMGGSGSANQLVGNVNDVTRRKRQGSSANLAVDDTHFSEEAVINWAD
GISKGSSHSLLKRMADPHTATSQALSTDLSSAIRLKNSGRPSSASSDEHKIESGVTSAGH
AVEAPASANKETGTFGMPPNTNLDASGPSFSEMLKSTKKPPLQYDASESADGGPGGKGTK
KKAKKGKQIDPSLLGFKVHSNRILMGEIHRPDD
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaggaagctggatcgattcgccgctctcgggaaagatggtctgtcgcttggg
atcgaggaggacaggaacaccgccgccgccatgggtttcgtcgaggaatccaaagatcag
cagcatctggagaacagcattcctctgtcccctcagtggctttatgccaaaccaaatgat
acgaagatttcagcacctcatgggtctttgctcgagcctgctgagaaggatgccaggatg
ctggaagggactaaagaacggcggcggaatgcatttgatactgacagcagtcttcgttgg
cttgatgaggagagggagaccagcttacttggaaggcgggagcgcaagaaggaagttgac
cgggatgtggagaatcgtaaaaatgatcgccgatctgacaatgttactgcaagggacaac
aatgattcacgggcacctcctacatctgaaaggtggaatgatggctccacccgcaattca
gggaatgaaggcagacgtgatggcaaatggtcattaagatggggacctgatgacaaggag
aaggagtccagaccagaaaagaagattgatgcagaaaaggatgaaactcatggtgagaaa
cagacatttcctggaaggttgctccctgagtcagactcccgtgataaatggagacctcgt
cacaggcaggagactcaacctgttggtacagcaacgtaccgtgctgctcctggattcgga
ctggagaaaggacgtgtgaaggactccaatgttgggttttcccctggaagaggcagggga
aaccccaactcagttccatccttcagccgcccatcatctgctggaccgattggtgctcca
cctgtgcatgggaggcgtgtgacaactgccggtgcttttcgctacccgaggggtaaactt
cttgacatctacaggcagcaaaagattgtcccatctttcgatggcggccaccgaacgctg
gaggatattccctccataacactccctacttctgttcagccactcgcctttgttacaccc
gacactgatgaagaggctgttctggaagatatcaggaaaggcagggtcattggcagtgaa
gttacaaatacaactgcgctccaaaaagagagaaaacaagatactgaagctcgtggtact
gatgacaaggataaaggcactgaggcatttagcgggttggggcatgaaggatctgctgct
ttaataacagagaaggatgccttctacaatgaagggatgtttgcaggtggtatccctgat
ccactcaagaaacatatagaggataatttccccagcaatcatattgagctttccagcacc
aaatcaagcgctgacattgatcttggtgccaagttaccagatgatccaaattctcattta
aatgtaaacattgacactactggccaggctagctatacagacgggaaagctagtggtctg
gctagttatccagaggagttgaccttgtattacctggatcctcaaggaggcgtgcagggt
ccttttatgggtacagatattatctcctggtatgaagatggatattttggtttggagcta
cctgtgcgtttatctcaggctccagatgaagctcctttccgcccactttctgaactcatg
ccgtaccttggacataagccccaacctctcccacctgtatcccgtggtgaaagtgctgaa
tccatggattctgtacataataattttgaagatgcacttcctacctctggttcttttggg
aagaatgatcaaacatctaaaggagattctgaaagttatggagtcaatcctaaaagaggt
gacaatgaagcatcattacagtcacgtaataatagctggttccttttacctgaaccagaa
aaggccgaagtgaagcctgatgttcgtcagcagcacattcctgaaacagtgagtcaggat
gctgaagaagtgttgtacactgggaggcctaacagcagcatgggtcaatctcgacaggat
ttcgataacgatcgtgcagatatccatttggcatcacttgattcccgttctggggttgga
gaagctaacctgccccatcatgatgcacctagagagaatgaactgagtcctctgggctta
ctttggtctgagctggaagggatgcatccgaagcaacctctctcatcaaatgtacttggt
gtaaatgagcgtagaaaccccaaagctacagctccaaaggatattccacctttgaatagc
aggcatgggcagcttagcaggatgaatgaagcccctgttgtgcgtgatgactggcctgct
agccttgggcggatggacagcatgaacgatgcaaacatttcaggtctaattccccaggtt
gaacctgagctaggtcatctgaattttgaggagcagatgctacttacacagattagaagg
gagcaactgcagcaagaacacttgatggctcgtaacagtttggagtttcctggaccattc
gcaggtcaggtctttgattcattgcaccagcacagacagtccattaatccaccagttcct
gaggtggagcatctgttgagaatccagtttgaacttgaacaacagcagcagcgccgccaa
cagcttcagcaagaacagcaccgccagcaacttcagcaggagcaacaccaaaggcagcta
cagcaagagcagcaccaaaggcagctgcagcagcgtcaagcccagcttctgcaacagcaa
cagcagcaacaacaacagctgattattgagcaaatgttgcagcaacagttgcaaggttca
aactttggaccaggcaacatggttgatcaagtgttacttcgggagcagttattgaatgac
ttgcatcaccaaccccatcattttcaaaggcagcatgatgcagcgattgaacaactcatt
caagcaaaatttgggcatgggcatcatagggagcaacagaatgatatgttggatgttctc
tcacggtcaaatcagaggcaggggcttcctctggagcagcaaattctgttaggcctgcac
catgatcagctccaatcacaacagatggccaatgctatacgacaacatgcgggcagggag
gatgaaaggcatttaagtggggtctggccaatggaggaccctaaccaatttatccgccca
ggaacaagtccaaatcaaagccacataaacagacttggtcaatttgaacttctgcagtcc
cttcagcggtcttcatctgtggagcatcatgaccatctggaccgaagcctctctttgcat
gagcggttgcataggggaggccaaggcattcactctcttgagcggtctggctctttgcct
ggtggcgcacctttaccaaatccagatgttgtaaatgctttagcacgtcaccatggcctc
ggtcagttagaaaaccagggtgatttatattctttaggccaaatgcctatgcatgcttca
ggggttcatccacagcaacacaggcttcaggagcaggtgtcaggttctcacatgggaagg
ctggaaaggaactggtcagatgccaatgggcaattgcaaaatagcctgatagaagcatca
cgcatcagccaattgcaaattgaagcagagaagcatagaaggaatgtggaaatgaacctt
cccattgacaacccacatgcatgggcatcacttatgaacaacgataggaacacagaacca
gatttaagtgatatgttccatcaaaaactggctcttcaatcccatcaatctcgtggtttc
actgatgttccattgacagcggcattcggacgtaaagacccttctttactctttgcacag
cctcctgcagataactctttgagatcacctgttgataggctgtcttttgatgatccactt
gcagaaaggtcacagtttgcaaagatggggcatttgggacagcaggagggatcaaccacc
ctagatagtttacctaacaatattgagatgagtcgaaaattgggccttaggtcgagctct
ggaactatgcttgatattcaaaggggagaatttccagatgtgatgggtggcagtggatct
gctaatcaattggttgggaatgtcaatgatgtaaccaggaggaaaaggcagggttctagt
gcgaacttggccgttgatgacacccatttctctgaagaagcagtcatcaactgggctgat
ggcatctccaaagggagctctcattccctactaaagcgcatggcagacccacacactgct
acatctcaggcactgtcaacagatctgtcttcagccattaggttgaagaattcgggccga
ccatcttctgcatcatctgatgagcacaagatcgaatcaggagtcacctcagcaggccat
gctgtggaagcccctgcatcagccaacaaagagacagggacgttcggcatgccaccaaac
accaatctggatgcctctggcccttcattcagtgaaatgctcaagagcacaaagaagcct
ccattgcagtatgatgcctctgaatctgcggacggtggccctggtggcaagggtacgaag
aagaaagcaaagaagggaaagcagatcgacccttcacttcttggcttcaaggtccacagc
aaccgcatcttgatgggtgagattcaccgccctgacgactaa
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integrated database retrieval system
