Brachypodium distachyon (stiff brome): 100826232
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Entry
100826232 CDS
T01717
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33
KO
K12896
serine/arginine-rich splicing factor 7
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100826232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100826232
Spliceosome [BR:
bdi03041
]
Common components
Common spliceosomal components
SR proteins
100826232
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_3
RRM_occluded
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
100826232
NCBI-ProteinID:
XP_003569022
UniProt:
I1HMF7
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All DBs
Position
2:37752282..37756074
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AA seq
335 aa
AA seq
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MPRYDDRYGKSRLYVGRLSSRTRTRDLEYLFSRYGRIREVELKRDYAFIEYSDPRDADDA
QYNLDGRDVDGSRIIVEFAKGIPRGPGGSREREYMGRGPPPGTGRCFNCGIDGHWARDCK
AGDWKNKCYRCGERGHIERNCQNSPRSLRRERSYSRSPSPRRGRARSRSYSRSQSYYSRS
RSRSLSESPRGRRREHDERRSRSLSYSRSPRRSLSPEAKEMDRSPTPDGSRSPRRSLSPE
VKHNVDSPRGRETSRSPSNGYRSPVANGRSPSLRGKDRSQSPTKDNRGSPSPRGNNGSPS
PRGNVDGVSPSPRGNGNDDVDVRQGSGSPTGNSSP
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctatgatgaccgttatgggaaatcacgcttgtatgttggtagattgtcctcc
cgcactcgtacacgtgacctagaatatcttttcagcagatatggcagaatacgcgaagtg
gagttgaagcgcgactatgcatttattgaatacagtgatcctcgtgatgctgatgatgca
caatacaacctagatggcagggatgttgatggtagccgcattattgttgagtttgctaaa
gggattccacgtggtccaggtggttcacgtgaacgtgaatatatgggaagagggccgcct
ccaggaacagggcgttgttttaactgtggtattgatggtcattgggcccgagactgtaag
gctggtgactggaagaacaaatgctaccgctgtggagaaaggggccatatagaaaggaat
tgccagaatagtccgagaagtctcaggcgcgagagaagttattcacgatccccatctcca
cgccgtggacgtgcccgcagtaggagctacagcagaagccagagttattacagccgatct
cggtccagatctttgtctgaatctcccagggggcgccgtcgggagcatgatgagaggaga
tcaaggagccttagctacagcaggagccccaggagatctctctccccagaagcaaaggaa
atggatcgcagccccacgcctgatggcagtcggagcccaaggcgatcactctccccagaa
gtaaagcacaatgttgatagccctcgggggagggagacaagcaggagcccttctaatggc
taccgtagtcctgtggccaatgggcgcagccctagtctgaggggcaaagacaggagccaa
agccctactaaggacaacaggggcagcccaagtccaaggggcaacaatggtagcccaagt
cctagaggcaatgttgatggtgtcagcccaagtccaaggggcaatggcaatgacgatgtt
gacgtccgtcagggctcaggctcgccaacaggaaactcgtctccctga
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