Brachypodium distachyon (stiff brome): 100826288
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Entry
100826288 CDS
T01717
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL30
KO
K12900
serine/arginine-rich splicing factor 10
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100826288
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bdi01009
]
100826288
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100826288
Protein phosphatases and associated proteins [BR:
bdi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100826288
Spliceosome [BR:
bdi03041
]
Common components
Common spliceosomal components
SR proteins
100826288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
100826288
NCBI-ProteinID:
XP_003578758
UniProt:
I1IH94
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All DBs
Position
4:3191806..3196366
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AA seq
295 aa
AA seq
DB search
MRRYSPPHRSPPRRGYGGSPAHRSPPRRGYGGSPPHRSPPRRGYGGRGRSPPRRGYGGRK
EQGSGSLLVRNIPLSARAEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDAS
EAQYHMNRQVFFGREITVVLAAESRKRPEDMRSRTRIRGYSGGQEGRRSSHYGRSRSRSR
SLSPRPRGGRPRSRSYSPAPRRRDDYSASPRGRESHRTKSPIRHPKENEEGKRRSYSPAG
RDGDQRDADNDYEKRSPPPDSDGSPSRRRAPARPSSGSPPGSRSRSPDASPARSD
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggtacagccccccacaccgtagccccccaaggaggggatatggcggcagccct
gcacatcgtagtcccccaaggaggggatatggcggcagccccccacatcgtagtccccca
aggaggggatatggtggtagaggaagaagtcctccaaggaggggatatggaggaaggaag
gagcaaggttctggaagtctcttggtccgcaacatcccattaagcgccagagcggaggat
cttcgagttccctttgaaaggtttggtcctgttagggatgtttacctgccaaaggattac
tacagcggggagccgcgaggatttgcatttgtggagtttgttgacccttatgacgcctct
gaagcccaatatcacatgaatcgtcaggtattttttggccgtgagataactgttgtactt
gcagctgagtcacggaaaaggccagaggatatgcgcagtagaactagaatcagggggtat
tctggaggtcaggaagggcgccgttcctcccattatggtaggtcccgttcccgttcacgc
tccctctccccacgacctcggggtggccgtcctcggtcaaggtcgtactctcctgctcca
agacggcgagatgactactcagcttccccacggggaagggagtctcatcgtacaaaatct
cctatccgtcatccaaaagaaaatgaagaaggcaagcggagatcctattctcctgctggc
agggatggtgaccaacgtgatgctgataatgattatgagaagaggtcgcccccacctgac
agtgatggatctccttcacgcaggagggcacccgccaggccatcctcaggatcgccccca
ggatcccgctccaggtcccctgacgcgtcccctgctcgcagcgactga
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