Brachypodium distachyon (stiff brome): 100826320
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Entry
100826320 CDS
T01717
Name
(RefSeq) serine/arginine-rich splicing factor SC35 isoform X2
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100826320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100826320
Spliceosome [BR:
bdi03041
]
Common components
Common spliceosomal components
SR proteins
100826320
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
100826320
NCBI-ProteinID:
XP_010235571
UniProt:
A0A0Q3JT69
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All DBs
Position
1:17212212..17216337
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AA seq
214 aa
AA seq
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MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEVVDIYIPRDRRTGDSRGFA
FVRYKYEDEAQKAVDRLDGRLVDGREMMVQFAKYGPNAERMYRDDHRGRDSYRRRSRSRD
RYERERYSERDYHRRSRSRSSSPDDYKRRGRDRSPSRSRSRSYSPVDDRRRRRDSVSPAR
KSPSRSPRRTPSSHEGSPVRRNDDQSPHSRSPST
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcttcggccgctccggcccgccgccgatccgcgacacctactcgctcctcgtc
ctcaacatcaccttccgtacgacggccgacgacctgttcccgctcttcgacaagtacggc
gaggtcgtcgacatctacatccccagggaccgcaggactggcgactcgcgagggtttgcc
ttcgtgaggtacaagtatgaagacgaagcgcagaaggcggttgatcgtctggacgggagg
ttggtagacgggagagagatgatggtgcagtttgccaagtacggcccaaatgcagagagg
atgtaccgggatgatcatcggggcagagattcttatagaaggcgaagccgtagtagagat
agatatgaacgtgaaaggtacagcgagagggattatcatcgtcgtagcaggagtcgcagc
tcaagtcctgatgattacaagaggcgtggtagagacaggagccctagtcgtagcaggagt
cgcagttacagtcctgttgatgacaggaggcgtcgaagagacagtgtgtcacctgcccgt
aaaagtcctagtcgctcccctcgcaggacaccatcttcccatgagggatctcctgtcagg
cgcaacgatgaccagtctccacactcccgtagcccttcaacataa
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