Brachypodium distachyon (stiff brome): 100827040
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Entry
100827040 CDS
T01717
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5B
KO
K14963
COMPASS component SWD3
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100827040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100827040
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
ATAC complex
100827040
NSL complex
100827040
HMT complexes
COMPASS/SET1 complex
100827040
COMPASS/SET1 complex (yeast)
100827040
MLL-HCF complex
100827040
MLL3/MLL4 complex
100827040
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
100827040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
WD40_like
Nup160
PROPPIN
Motif
Other DBs
NCBI-GeneID:
100827040
NCBI-ProteinID:
XP_003562864
UniProt:
I1GT77
LinkDB
All DBs
Position
1:complement(19317017..19320107)
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AA seq
331 aa
AA seq
DB search
MSSGAQQTPPPPPPYRPYRQARSATPHARAISCVRFSPCGRLLATASLDGTAALLSPSSL
AVIANLRGHADGVSDLSWSTDSAYLCSASDDGTLRIWDIRSILSASKPPADPNVDRCIRV
LKGHTNFVFSANFNPQTSSQVASGGFDCTVRIWDVKGTRCERVIEAHSEPVTSVHFIRDG
SIIVSGSHDGSCKIWDARTGSCLKTVIDDKKPAVSCSMFSPNGKFILVATLDDSLKLCNY
ATGKFLKVYSGHVNRVYCIQSAFSVTNGKYIVSGSEDNCVYIWDLQGKNILQKIEGHTDA
VISVSCHPTENKIASGSLDNDRTVRLWVQDG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaggggctcagcagacgccgcccccgccgccgccttaccggccgtaccggcag
gcgcgctcggcgacccctcacgcacgggccatctcctgcgtgcggttctctccctgcggc
cgcctcctagcgacggcgtccctcgacggcacggccgccctcctctccccgtcctctctc
gccgtcatcgccaacctgcgcggccatgccgacggcgtctccgacctctcctggtccacg
gactcggcctacctctgctccgcgtccgacgacggcaccctccgcatctgggacatccgc
tccatcctctccgcctccaagccccccgccgaccccaacgtcgaccgctgcatccgcgtg
ctcaagggccacaccaacttcgtcttcagcgccaacttcaacccgcagacgagctcccag
gtcgcgtcggggggtttcgactgcaccgtgcgcatctgggacgtcaagggcacccgctgc
gaacgcgtcatcgaagcgcactctgagcccgtcacctccgtgcacttcatccgggacgga
tcgatcattgtgtctgggagccatgatgggagctgcaagatttgggatgcgcgcactggg
tcttgtctcaagacggtcattgatgacaagaagcctgcggtttcctgctcaatgttctca
ccaaatggcaagtttatcctagttgccacactcgatgactcattgaaactgtgcaattat
gctactggcaagttcttgaaggtatatagtggacatgtgaacagagtatactgcatccag
tctgcattttctgtcacgaatgggaagtacattgttagtggatcagaggacaattgcgtt
tatatatgggacctccaagggaaaaacattcttcagaaaattgaaggccataccgatgct
gtcatctcagtgtcctgtcatccaacagagaacaaaattgcttctggcagccttgataac
gataggactgtgagactctgggttcaagatggttga
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