KEGG   Brachypodium distachyon (stiff brome): 100827377
Entry
100827377         CDS       T01717                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100827377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bdi03041]
    100827377
Spliceosome [BR:bdi03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100827377
 Complex B
    100827377
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 100827377
NCBI-ProteinID: XP_003569529
UniProt: I1HQ79
LinkDB
Position
2:complement(46288232..46291609)
AA seq 281 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRIHNRPTISPTIVLMNMYQRPDMITP
GVDAQGQPIDPRKMQEHFEDFYEDIFEELSKFGEIETLNVCDNLSDHMIGNVYVQFREED
QAAAAHTALQGRFYSGRLIIVDFSPVTDFREATCRQYEENTCTRGGHCNFMHVKQIGKDL
RKKLFGRYRRSHRGRSRSPSPHHRRERRDRDDYRGRDDYRRGGGGGGGGRRGGSSRNERH
DDGGRRRYGGSPPRRARSPVRENSEERRAKIEQWNREKEAK
NT seq 846 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcttcaatatttggtacggagaaagatagggtgaactgtccattt
tacttcaagattggagcttgccgtcatggggatcgctgctctcgaatccataacaggcca
accatatcaccgacaattgtgcttatgaatatgtatcagcgccctgatatgattactcct
ggggttgatgctcaaggccagccaattgatccccgcaagatgcaggagcattttgaagat
ttctatgaggatatctttgaggaactgagcaagtttggcgagatcgagaccctcaacgtc
tgtgataacctttctgatcacatgatcggcaatgtttatgtccagttcagggaggaagat
caggctgcagcagctcatacagcccttcagggtcgattttactctggccgtctaataatt
gttgacttctcccctgtgactgacttccgtgaagcgacctgcaggcagtatgaggagaat
acctgcactcgtggcggacactgcaatttcatgcatgtgaaacagataggtaaggatctc
aggaaaaaactctttgggcgttacagaaggtcgcaccgaggaaggagccgcagcccaagc
ccacaccacaggagagagcgtcgtgaccgtgatgactatcgaggccgtgatgattaccgc
cgtggtggtggtggtggtggcggtggacggaggggtgggagcagcaggaacgaaaggcat
gatgatggaggaaggcgtaggtacgggggcagccccccaaggcgggcaagaagccctgtc
agggagaacagcgaagagcgtagagccaagatcgaacagtggaatcgtgaaaaggaggcg
aagtaa

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