Brachypodium distachyon (stiff brome): 100827669 Help Entry 100827669         CDS       T01717                                  Name (RefSeq) homeobox-DDT domain protein RLT2 Organism bdi  Brachypodium distachyon (stiff brome) SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WSD DDT HARE-HTH Homeodomain WHIM1 Homeobox_KN Motif Other DBs NCBI-GeneID:  100827669 NCBI-ProteinID:  XP_003566982 UniProt:  A0A0Q3MXW2 LinkDB All DBs Position 2:46418917..46433139 Genome browser AA seq 1845 aa AA seqDB search MDAGGGDGDGPPLETPEERTSPPPAPATVAAPASGSGGGAGPSGSGEKPVKRMMKTPYQL DVLEQTYLAEQYPSEAMRAELSVKIGLSDRQLQMWFCHRRLKDRKPPAKRQRRDEEAPAA PLLVPPPVLPLQAMLLASSDLMMSAVSPYDEPLPPTHPRRGGGRSSAVPRISAPDIGRRY YEPLPVMMSPPVASMQFRQAELRVINSVESQLGEPLREDGPVLGVEFDPLPPGAFGAPIV PEQQKQPVRSYDAKIFSRHDPNLLKVSSFLPSMEHPFVPNSFAGKRKSTIGNTSQDLPHG GSRAVHEYQFLPEQPSDTYERASRSHYYDTPVEASNSRISSLTPGSHLLHGSEEVAPGYA FEGQISGSGLLPQSGRPQVFPAASTDYEMNPSNSNLNSVPVEGQFGISQVAGYEDPLISS EGRAHLDEDASRLDRKRKHNEEAKIAKEVEAHERRIRKELEKQDMLRKKREEQMRKEMER HDRERRKEEERLLRERQREEERFQREQKREHERMEKFLQKQSRRAEKQRQKEELRKEKEA ARQKAANERATARRIAREYMELVEDERLELMELAAQSKGLPSMLSLDSDTLQQLDSFRGM LSQFPPETVKLKVPFLIKPWTGSENNLGNLLMVWKFLITFADVLGLSAVTLDEFVQSLHD YDSRLLGEFHVALLKSIIKDIEDVARTPSVALGVNPGGGHPQIVEGAYSWGFNIRSWQHH LNLLTWPEILRQFALSAGFGPQLKKRNAEDVFYRDENEGQDGQNVISTLRNGSAAVRAAA LMKERGYTHRRSRHRLTPGTVKFAAFHVLSLEESNGLTILEVAEKIQKSGLRDLTTSKTP EASIAAALSRDTKLFERTAPSTYCVKSPYRKDPADSEAILSAAREKIRAFQNVLSDSEVE KEVDDAERDEDSECDDADDDPDVDDVNIEVGDGDPLAVKAQDVVPMATEVGDIKGEADST DTALTQPISFAKSEKGAIILSLDKSNAAGTSSVSPLRASSDHHEVITGNAEDAEIDESYQ GESWVRGLAEGDYYNLSVEERLNALVALVGVATEGNSIRAVLEERLEAANAIKKQMWAEA QLDKRRSKEEFASRMQYSSYTSLKADVNPEHNATETTPTPARNIDIDTDGNMGAVNNTEM LDQYSHSNAGNVSYERNGVGQDISSTPDNLSAQQYAYADKTRSQLKSYIGHRAEQLYVYR SLPLGQDRRRNRYWQFSTSASPNDPGSGRIFFESRDGYWRVIDSEEAFDSLVASLDTRGS REAQLHSMLQRIEATFKEGIKRKSNAATEQPAGRYLKNGATDLMQGSYRSEFGSPSSTLS TVSSDSFRIELGRNDAEKTAISKRADGFLKWMWRECYDRKLTCAVKYGKKRCSTLIHSCC YCYQIYLAEERHCSSCHKIFKPIHNFSEHVSQCEEKRRTDPNWKMQIEDYSVPIGIRMLK LQLATIEAMIPSEALQPFWTDGYRKSWGVKLHSTESVEEIFQMLTLLEGAIRRDYLSSEF ETTSEYLNLNIQDMHSQNPFGLSGASVLTWVPDTIAAITLRMLELDYAVSYTQNQKTERD GGDSMKLPSRHTVVKKTQHIEPLEPASVDLYDGRWPPSSGRRGRGRGSRGGSRGGRGRSR GGRVPRGVSSSSRIEFRDDTAAYEKAPRKNARRGRGRGRGRGRGRRTVRPRQPSSDGRGR SIPKANLLGSFSMLSNVKPATVTESPRSSGAEEWGLEDRRPYMEVDENSSGSQSDQSEDI EENGQPMDEDYDEQVPDYSIAYSSGSRPHGVMDDETDEEDEDAEGDAEGDEDGEDDDVNH AAAADDDEMDEDDDIGDDGDDGGDGVEANADEDEGATSYSSEYSE NT seq 5538 nt NT seq  +upstreamnt  +downstreamnt atggacgccggcggcggtgatggagacgggccgccgctggagacccctgaggagaggacg tctccgcctcccgcgccggcaacagtcgccgccccagcttctggctccgggggcggcgcg ggtccctctggctctggggagaagccggtgaagcgcatgatgaagaccccctaccagctt gatgttctcgagcagacgtatttagcggagcagtacccctcggaggctatgcgcgccgag ctgtcagtgaagataggtctgtcggacaggcagctgcaaatgtggttctgccacaggcgg ctcaaggacaggaagccaccggccaagaggcaacggcgcgacgaagaagctccggcagcg cccttactggtgccaccaccagtattgccgctgcaggcaatgctgctggctagcagtgac cttatgatgagtgctgtcagtccatatgatgagccactcccccccactcatccgcgaagg ggaggtgggcgatcttctgctgtgcccaggatttctgctcctgatattgggaggaggtac tacgagccactgccagttatgatgtcaccaccggtggcatcgatgcagttcaggcaagct gaactcagggtgattaattctgtggagtcacagctcggggagccgttgagggaggatgga ccagtgctcggtgttgaatttgatccccttcctccaggtgcctttggtgcaccaattgtt ccggagcaacaaaagcagccagtgcgatcttatgatgcaaagatattttctaggcatgat ccaaatctcttaaaggtatcgtcattcttgcccagcatggagcacccttttgttccgaat tcgtttgctgggaagagaaaatcaacgatcggtaatacatctcaggatctgcctcatggt ggatcccgggcagtccatgagtatcaatttcttcctgaacagccaagtgatacatatgag agagcaagtagatctcattactatgacactccagttgaagcttcaaattcgaggatatca tctcttactccaggatcgcatcttcttcatggatccgaggaggtggctcctggttatgct tttgaaggccaaatatctggttctggtcttctgcctcaatctggcaggcctcaggtgttt ccagcagcatcaacagattacgagatgaatccgtctaatagcaaccttaattctgtgcca gttgagggtcagtttggtatttctcaagttgctggctatgaagacccacttatatcatcg gaaggaagggctcatcttgacgaagatgcttctcgattggatagaaagcgaaaacataac gaggaagcaaaaatcgcaaaggaagttgaggctcacgaaagacgaattaggaaggagctt gagaaacaggatatgttgaggaaaaagagagaggaacaaatgcgcaaggaaatggagaga catgatcgtgaaaggagaaaagaggaggagagattgttgcgtgagaggcaaagagaggaa gaaaggttccaaagggaacaaaaacgtgaacatgagcgcatggagaaatttttgcagaag caatctagacgagcagagaaacaaaggcaaaaggaagaactcagaaaagagaaagaggcg gcgaggcaaaaagctgccaatgaaagagccacagcacgcagaattgcaagggagtatatg gaacttgttgaagatgagcgcttggagctaatggaattggctgcacaaagcaaagggttg ccctcaatgctttctcttgatagtgacacattgcagcagcttgattcatttcgaggcatg ttgagccaattcccccctgagacggtgaaactgaaggtgccatttttgataaagccttgg acaggatctgagaacaatcttggaaatcttttgatggtgtggaaattcttgattactttt gctgatgttctcgggctttcagcagttacacttgatgagtttgtccagtcacttcatgat tatgattcaaggttgttgggggaattccatgttgctcttctgaaatccatcataaaggat atcgaggatgttgcacgaactccatcggttgcactgggtgtgaatccaggcggtggccat ccacaaattgttgaaggggcatattcttggggcttcaatatacgtagctggcagcaccac ctcaatcttcttacttggcctgaaatattacgacagtttgctttatctgctggttttgga ccccaattaaagaaaaggaacgctgaagatgttttttatcgcgatgaaaatgagggtcag gatggtcagaatgtcatatccactctccgaaatggttcagcagccgtgagggctgctgct ttgatgaaagaaagaggctacacccatcggagatctcggcaccgcctcactcccggaaca gtaaaatttgctgctttccatgtgctttctcttgaagaaagcaacggtctcacgatattg gaagttgcagaaaaaatccagaaatcgggattacgagaccttaccacaagcaagacgcct gaggcatctatagctgctgccttatcaagggacacgaaactttttgagcgaactgctcct tcaacatattgtgtcaagtccccttatagaaaagatccagctgactctgaggctatattg tctgcagcgcgtgaaaaaattagggcttttcagaatgtgctttctgactctgaagttgag aaggaggtggatgatgctgagagggacgaggattctgaatgtgatgatgctgatgatgat cctgatgttgatgatgtgaatattgaggtaggagatggtgatccccttgctgttaaagca caagatgtagtaccaatggcaactgaagttggtgacataaagggagaggcagatagcacg gatactgcattaacccaaccaattagtttcgctaaatctgaaaagggtgctatcattctt tctttagacaagtccaacgcggcaggtacttcaagtgtttcacctctcagagcttcatct gatcatcacgaggtaatcactggtaatgcggaagatgcagaaattgatgaaagctaccag ggcgagtcttgggtacggggattggcagaaggtgactattacaatcttagtgtcgaggaa cggcttaatgcattggtcgcacttgttggtgttgccactgaagggaactccatccgtgct gttcttgaggaacgtttggaagcagcgaatgccataaagaaacaaatgtgggcggaggca caacttgataagaggcgttccaaggaagagtttgctagcagaatgcagtacagttcttac acgagtttaaaggctgatgttaatccagaacataatgctacagagactactccaactcca gcccgtaatattgatatagatactgatgggaatatgggggctgtaaacaataccgagatg cttgatcaatatagtcacagtaatgctggaaatgtgtcatatgagaggaatggtgtaggg caggacatcagttcgacaccagataatttatctgctcagcagtatgcctatgctgataaa acacggtctcagttgaaatcatacattggtcatagagcagagcagctgtatgtttacaga tcactgcctctgggtcaggatcgcagacgaaaccgatattggcagttctcaacttctgca tcaccaaatgaccctggttcaggaagaatcttttttgaatcgagagatggatattggagg gttattgactcagaggaggcgtttgattctttagtagcttcacttgatacacgtggcagc cgggaggcacagttgcattcgatgttgcaaaggattgaagcaacctttaaggaaggtatt aagaggaaaagtaacgcggctacagaacagccagctggaaggtatttaaagaatggagct actgacttgatgcagggaagttaccgtagtgagtttggaagcccaagcagtactctttct actgtatcgtctgattctttcagaatagagcttgggcgtaatgatgctgagaagactgct atctcgaaaagggcagatggttttttgaaatggatgtggagggaatgctacgatcgcaaa ctgacatgtgccgtgaagtatgggaagaaaagatgctctacattgattcattcttgttgt tactgctatcagatttacttagcagaagaaaggcactgctcttcgtgccataagattttc aaacccattcacaatttttctgagcacgtgtcacaatgtgaagagaagcggagaactgac cctaactggaagatgcaaattgaagactactctgttccaataggaatcagaatgctaaaa ttgcagttagctacaattgaggctatgataccatcagaagcacttcaaccattttggact gatggatatcggaaatcctggggtgtaaagttgcactctactgaatctgttgaggaaatt tttcagatgttgactctgctggaaggtgcaataagacgagactatttatcttctgaattt gaaacgacgagtgaatatcttaacttaaacatacaagatatgcattcccagaatcctttt ggattgtctggagcttctgtacttacatgggttcctgacactattgctgccatcacgtta agaatgttggaacttgattatgcggtttcatacacacaaaatcagaagacagagagagat ggtggagattccatgaagcttccatcaaggcatacagttgttaagaagacacaacatata gagccgttggaaccagctagtgttgacttgtatgatggaaggtggccccccagtagtggc cgcaggggtcgtggacggggaagtagaggaggtagcaggggaggaagaggtcgaagtcga ggtggaagggtcccgagaggtgttagcagctcatctaggatcgaatttcgggatgacact gctgcatatgagaaagccccaagaaagaatgcacgtcgaggacgtggtcgtggccgcggc cgcgggcgaggacgtcgaacagttaggcctcgacagccatcatctgatgggagaggcaga tctattccaaaggctaatttattgggaagctttagcatgcttagcaatgtgaaacctgcc accgtcacggagtctccacgaagctcaggtgcggaagagtggggcttggaggacaggagg ccatatatggaagttgatgagaacagctcggggtctcagtcagatcaatcagaagacatt gaggaaaatggccaacccatggatgaggattacgatgagcaagttccagattactccata gcctattctagtgggtccagaccccatggcgtgatggatgatgagaccgacgaggaggat gaagatgctgaaggggacgcggagggtgatgaggacggggaagacgatgacgtcaaccat gctgctgctgctgatgatgatgagatggacgaggatgacgatataggcgatgatggagac gatggtggcgacggagttgaggcgaatgcagatgaagatgaaggcgctacctcgtattcg tctgagtacagcgaataa

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