Brachypodium distachyon (stiff brome): 100829105
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Entry
100829105 CDS
T01717
Name
(RefSeq) RAN GTPase-activating protein 2 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100829105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100829105
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100829105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_4
DUF6715
LRR_9
Motif
Other DBs
NCBI-GeneID:
100829105
NCBI-ProteinID:
XP_003571403
LinkDB
All DBs
Position
3:complement(13744740..13752634)
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AA seq
619 aa
AA seq
DB search
MTRLSLIFILPAQPMFPHISPSQPKPNSFQIFFVQSPNRRRRRRSLLPGVHAGRPQLPPP
PLSARTGFDLGCCAEVPHFLMDSPVWGFSIKLWPLSESTRLMVIDRMTENPSTETLFSRK
YGRLDKEEARENAKRIEETCFASVDEHFKEEPDGDGSSAVQLYARETSKLMVEVLKRGPR
ASAELEAPVVIDAPLEPADTVLDISGGKRAFIDTDEAKELLIPLTKPGNSYKRICFSNRS
FGIDAANVAGPILESIKKQITEVDISDFVAGRPEDEALDVMRIFSKALEGSVLRYLNISD
NALGEKGVRAFEELLKSQDNLEEFSVMNDGISEEAAKALSELIPSTEILKVLHFHNNMTG
DEGALSIAEMVKRSSNLESFRCSATRIGSDGGVALAEALGTCTRLKKLDLRDNLFGVEAG
IALSKTLPKLPDLVELYLSDLNLENKGTIAIANALKQSAPRLEVLEMAGNEITAKATQAL
AECLTVMQSLKKLTLAENELEDRGAVVIAKTLENSHPDLKELDVSTNMLRRAGARCFAQA
IADKPGFVQLNINGNFISDEGIEEVKKILKSGKNSLSVLGSLDENDPEGEPGDGDEEGDE
EDDEGGLDSKLQNLNVEQD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggcttagtttaatcttcattcttccagcccagcccatgtttccacatatcagc
ccatcccagcccaaacctaactccttccaaattttcttcgtccagtcgccaaaccgccgc
cgccgccgtcgctcccttcttccaggagtccacgccgggcgacctcaactgccaccgccg
ccgctatcggcccggacggggtttgatctaggttgctgtgcagaagtgccgcatttcctc
atggattcgccggtctggggattctccatcaagctgtggccgctgagcgaaagcacacgc
ctgatggtcatcgataggatgacagagaacccgtccaccgagacgctcttttctcgcaag
tatggtcgtttggacaaggaagaggctcgcgagaacgctaagaggattgaagagacctgc
tttgcttctgtggatgagcatttcaaggaggagcctgatggtgatgggagttcagctgtt
cagctatacgctagagaaactagcaagttgatggtggaggtcctgaagagaggcccaagg
gcaagtgccgagctggaagcacctgttgttattgatgcacctcttgagcctgctgataca
gtgctcgatatatctggtggcaagcgtgcttttatcgacacggacgaagcaaaggaactt
ctgatcccacttaccaagccggggaactcttataaaaggatctgcttcagcaataggagc
tttggtatcgatgctgccaatgttgctggtccgattcttgaatccatcaagaagcagatc
acagaggtagacatctctgattttgttgcaggaaggcctgaggatgaagcccttgatgtg
atgcgcatattctccaaagccttggaaggttctgtgttgagatacctgaacatctctgac
aatgctttaggcgagaagggtgtcagggcattcgaagagctcttgaaatcacaggacaac
ctggaagaattctctgtgatgaacgatggtatatcagaggaagctgcaaaggctctatct
gagcttattccttcaactgagattcttaaggttctccacttccacaacaacatgactggg
gatgaaggtgctttgtcaattgctgagatggttaagcgttcttcaaacctagagagtttt
aggtgctcagcaacaaggataggatctgatggtggggtggcattggctgaggcattaggg
acatgcactcgtctgaagaaacttgacctcagggacaacttgtttggtgttgaggcaggg
atagctctcagcaaaacgcttcctaagcttcctgatctcgtggagctgtatctcagtgac
ctcaatctcgagaacaaaggtacgatagcaattgccaatgccctcaaacagtcagctcct
cgattggaagtccttgaaatggctggaaatgaaataactgcgaaagcaacccaagcttta
gcagaatgtctaacagtgatgcaatcgctcaagaagctgacgttggctgagaatgaactg
gaggaccgtggcgctgtggtgattgcaaaaacattagaaaacagtcacccagatctgaag
gagcttgatgtgagcacaaatatgctgcggagagccggagctcggtgctttgcccaggca
atcgcagacaaaccaggttttgtgcagctgaacatcaatgggaatttcatctctgatgaa
ggaattgaggaggtaaaaaagattctgaagagtggtaagaactcgctgagcgtgcttggc
tcactggacgagaacgatcctgagggggaacccggagatggtgacgaggaaggggatgag
gaggatgacgaaggtgggctggactcgaagttgcagaacctcaatgttgagcaggactag
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