Brachypodium distachyon (stiff brome): 100829173
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Entry
100829173 CDS
T01717
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100829173
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100829173
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
ALIX_LYPXL_bnd
CTK3
TEX13
Motif
Other DBs
NCBI-GeneID:
100829173
NCBI-ProteinID:
XP_003564969
UniProt:
A0A2K2DGV5
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Position
2:complement(56834004..56845069)
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AA seq
463 aa
AA seq
DB search
MNTGFSSEIFAQKLARLNISQQSIETLSHWCVFHHRHCEQVVETWDKDFHSAPQERKIFL
LYLANDIIQNSKKEGMRYISEFWKVIEAALDDLFTNGDDFGRNVVQRLVNIWEDRKLFGP
QGQLLKEEYTRKFKELKSNKSGGELVEKVISSYKHMLSAPIDEDKLMRKCNSALSFVDNL
NKEYGNSHPGSSNGSGFVEELQQQHSILRSTIEQFKTAESLRATLVSDLKDSLHEQEFKL
ELVRHQLRAAQARYKKADEVCQKLGIDTERQEPTNKALDNVGSLGKGQSAAVMYSQEGDG
GEHETLNGIFSSQAIRNNVEQKIEEHSSGNKRLKLENGICVPQPQAPPPPPPFPHPDTFE
QPPPPPQYPPSPESSPPPPPSMPPPIPPPPPPPTTNEYMPVPAAPMAGMMPYNAFPPFPP
SLNYPMINMPPPFPVAPNSHQGQGYYGSGGQFYGPPFPSAPPQ
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaggattcagctcagagatctttgcgcagaagcttgcgaggcttaatatctca
caacagagcatagagactttatcacattggtgtgtctttcaccatcgtcactgcgagcaa
gttgttgaaacatgggataaagattttcactcagctcctcaagagagaaagatatttctg
ctgtacctcgcaaatgatattatacagaacagtaagaaggagggcatgaggtatataagt
gaattctggaaggtcatcgaggctgctttagatgacttgttcaccaatggtgatgatttt
ggaaggaacgttgtacaaagactggttaacatatgggaggatcgcaaattgtttggcccc
caaggacaacttctgaaggaagagtacacaagaaaattcaaggagctcaagtcgaacaaa
tctggtggagagctagtggagaaggttatctcgagctacaagcacatgctgagcgctcct
atagatgaggataagttaatgcggaaatgcaacagtgctcttagctttgttgacaatctc
aacaaagaatatggaaactctcatccagggagtagcaatggatctggctttgtggaggag
ctgcagcaacaacatagtatcctgagaagcaccattgaacaattcaaaacggctgaatca
ctcagagccactctggtttctgatttgaaggactcacttcatgagcaggagttcaaattg
gaactagtcaggcaccaacttcgggcagctcaggcccgatataagaaagctgatgaggtc
tgccagaagcttggaatagatacagaaaggcaggagccaactaataaagcgcttgacaat
gttggttctcttgggaagggacaatcggctgcagtgatgtattcacaggaaggagatgga
ggtgagcacgagaccctcaatggtattttttcttcacaagccatcaggaacaacgttgag
cagaaaatagaagagcactcttctggtaataagaggctgaaactagagaatggtatatgt
gttcctcaaccacaagcacccccacccccacccccgttcccgcatcctgatacatttgaa
cagccaccgccgccgcctcagtatcctccatcaccagagtctagcccaccaccaccacct
tcaatgccgcccccaatcccaccaccaccgccgccgcctacaacaaatgaatatatgcca
gtccctgctgctccaatggcaggaatgatgccatacaacgctttcccaccatttcctcca
tctctgaactatcccatgatcaacatgcctccacctttccctgttgctccaaactctcat
caaggtcaaggttactatggatcagggggtcagttctacggccctcctttcccctcggca
cccccgcaataa
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