Brachypodium distachyon (stiff brome): 100831412
Help
Entry
100831412 CDS
T01717
Name
(RefSeq) pre-mRNA-splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100831412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100831412
Spliceosome [BR:
bdi03041
]
Complex B
Other components
Prp19-related factors
100831412
Complex C
100831412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
SoxA-TsdA_cyt-c
EthD
Motif
Other DBs
NCBI-GeneID:
100831412
NCBI-ProteinID:
XP_003563548
UniProt:
I1GWY3
LinkDB
All DBs
Position
1:30569907..30573102
Genome browser
AA seq
341 aa
AA seq
DB search
MGKEEAAGKSQPECINSSNPYHECSDYCLHQIAEAQRRLAEDLPDSRPPEERTVHPDCIN
ASNPYHGCSEYCFKKIADAKAALERGEQEHPAGGSGKSDIALEQADGDDDSSRQEEAGAD
EGYPQMTAKQKKLFELQLKMNEARKANQQAMVAEKKRMEPRGESRGVSKQKWLDDRKKKI
GKLLDSNGLDMSKSYMLDTQDMAEAKYKKWEKEPAPHGWDVFNQKTLYDAYKKRTKNIEV
DMESYNKAKETDPEFYRDASSLQYGKVSKVAEPNIDRMVNELKERDEKRKSFSRRRKFNE
DKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaggaggcggcggggaagtcgcagccggagtgcatcaactcgtcgaacccg
taccatgagtgctccgactactgcctccaccagatcgccgaggcccagcggcgcctcgcc
gaagacctcccggactcgcggcccccggaggagcgcaccgtccaccctgactgtatcaac
gcctccaacccctatcatggctgctctgagtattgctttaagaagattgctgacgccaaa
gctgcattggagcgtggggagcaggagcatcctgctggaggttctggcaaatcagacatc
gcacttgagcaggctgatggtgatgatgattccagtcggcaggaggaggcgggcgcagat
gagggttatccccagatgactgcgaagcagaagaaattgtttgagctgcagctcaagatg
aacgaagctaggaaggcgaatcagcaggcaatggttgcagagaagaagaggatggagcct
cgtggcgagagcagaggcgtttctaagcagaagtggttagacgacaggaagaagaagatc
gggaagctgctcgattcgaatggcctggatatgtcaaagtcttacatgcttgacacacag
gacatggcagaagcaaaatacaagaagtgggagaaggaacctgcaccacatggctgggat
gttttcaaccagaaaactttgtatgatgcatacaaaaagcggaccaagaacatagaggtt
gacatggagtcatataataaagcaaaagaaactgatcctgagttttaccgcgacgcttcg
agtcttcaatatgggaaggtgtctaaagtggcggaaccgaacattgacagaatggtcaat
gaactcaaggagcgcgatgagaaacggaaatcgttcagcaggagacgcaagttcaacgaa
gacaaagacattgactcgatcaacgaccggaatgagcatttcaacaagaagattgagaga
gcctttggcaaatacacgctggagatcaagaacaatttggaaagagggactgccttgcca
gattaa
DBGET
integrated database retrieval system
