Brachypodium distachyon (stiff brome): 100831472
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Entry
100831472 CDS
T01717
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100831472
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bdi01009
]
100831472
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100831472
03036 Chromosome and associated proteins [BR:
bdi03036
]
100831472
Protein phosphatases and associated proteins [BR:
bdi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100831472
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100831472
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100831472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
Htt_N-HEAT_1
Vac14_Fab1_bd
PDS5
Cnd1
CLASP_N
Adaptin_N
CEP104-like_TOG
V-ATPase_H_C
DUF3102
Motif
Other DBs
NCBI-GeneID:
100831472
NCBI-ProteinID:
XP_003577041
UniProt:
I1IIW4
LinkDB
All DBs
Position
4:7839324..7846900
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AA seq
587 aa
AA seq
DB search
MAMADEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDE
DEVLLAMAEELGVFIPYVGGVEHAHVLLSPLETLSTVEETCVRDKAVESLCRIGAQMKEN
DIVDFFIQVVKRLASGEWFTARVSSCGLFHIAYPSATDPLKAELRTIYGQLCQDDMPMVR
RAAASNLGKFAATVEQSHLKTEIMSIFDDLTRDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRVDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPQLAVQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDKVFSIREAAANNLKRLAEEFGPEWAMQHIIPQV
LEKINNPHYLYRMTILQAISLLAPVMGVEITCQKLLPVVINSSKDRVPNIKFNVAKVLQS
LVPIIDQSVAEKTVKPCLVELSEDPDVDVRYYANQALQACDQIMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatggccgatgagcctctatatccaattgctgtactgatagatgagcttaaaaat
gaagatattcaattgcgcctgaactccatcagaagactttccacaattgcacgggcactt
ggggaagaaagaaccaggaaggaactgattccctttctcagtgaaaacaacgatgatgaa
gatgaagtgcttcttgcaatggcagaagaattgggtgtgttcattccttatgttggtggt
gtagagcatgctcatgttttgctctcaccattggagacgttgtctacggtggaggaaaca
tgtgtccgagacaaagcagtcgagtcgctgtgccgtattggtgcacagatgaaggaaaat
gacattgttgacttctttatccaagtagtaaagaggctagcgtctggtgaatggtttaca
gctagagtatcatcatgtggtctcttccatatagcgtatccaagtgccactgatccgttg
aaagcagaacttaggaccatttatggccagttatgccaagatgacatgcctatggtcaga
agggcagctgcatcaaatcttgggaagtttgctgccacagtggaacagagccatttgaag
acagaaataatgtcgatatttgatgatttaacacgagatgatcaagattcagtacgttta
ctagctgttgaaggctgtgctgctcttggaaaattgttggaaccccaagactgtgtagca
catatccttccagtcattgtcaacttctcccaggataaatcttggcgtgttcgctatatg
gttgccaatcaattgtatgagctatgcgaggctgttggccctgagcctacaagagtggac
ctggtgcctgcatatgttcgccttcttcgtgataatgaggctgaagtgcgtatagcagct
gccggaaaagttaccaagttctgcaggatattaagtcctcagcttgcagttcagcacatt
cttccatgtgtcaaggaattgtcatcggattcatctcagcatgttcgctcagctttggct
tcagtgattatgggaatggcccctgtcttggggaaggatgctaccattgaacaacttctt
cctatttttctttctttgctgaaggatgaatttcctgatgttcgactcaacataattagt
aaacttgatcaagtgaatcaggtcattggaattgatttgctgtctcaatctctattgccg
gccattgtagaacttgcagaggataggcattggagggttcgccttgcaataattgagtac
atccctctgttggccagtcagttaggtgttgggttttttgatgacaagcttggggcactt
tgcatgcaatggttggaagataaggttttttctataagagaggctgctgcgaacaacttg
aagcgcctggcggaggagttcggtccagagtgggcaatgcagcatattattcctcaggtg
ctggagaagataaacaacccacattatctgtatcgcatgaccatcctgcaagctatctca
ttgctagcccctgtcatgggggtagaaataacatgtcaaaagctgctccctgttgtcatt
aattcctcaaaggacagagtgccgaacatcaagttcaatgttgcaaaagttctgcagtcg
cttgtaccaatcatcgatcaatctgttgccgagaagactgtgaaaccttgccttgtcgag
ctcagcgaggaccctgatgtcgatgtaagatactatgcaaaccaggcccttcaggcatgt
gaccaaatcatgatgtcaagctaa
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