Brachypodium distachyon (stiff brome): 100831864
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Entry
100831864 CDS
T01717
Name
(RefSeq) DNA repair and recombination protein RAD54
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100831864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100831864
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100831864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
100831864
NCBI-ProteinID:
XP_003573054
UniProt:
I1IEW6
LinkDB
All DBs
Position
3:57402101..57415615
Genome browser
AA seq
965 aa
AA seq
DB search
MRPSRSRCDRRGSDADEEEVVALSSDPDESESEPEGGAEVDDDEEYVGESSDAGGVDDEA
EEGGGGSDNGGGGRLVRGARRGAVAPDEERKSQNVDALVRGNLVVRRQPLIPRILSVSDA
AAIARKPFKPPCENGYSENNEHLARRLSARKRFVPWGSMQPFAVISNLPQSSTIASDDSL
EKEESLPPGIEPLILWQPEGCDKENNNFAAIEVDNLLVRYLRPHQREGVQFMFDCVSGLL
SDDGIAGCILADDMGLGKTLQSIALLYTLLAQGFDGKPMVKRAVIVTPTSLVSNWESEIS
KWLKGKVQLLALCESTRADVLSGIGSFLKPLSRLQVLIISYETFRMHSSKFERPASCDLL
ICDEAHRLKNDQTLTNKALAALPCTRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDAAYF
RRYYEAPIICGREPTATAEEKKLGSERSGELSAKVNQFILRRTNALLSNHLPPKIVEVVC
CKLTPLQTTLYNHFIHSKNVKRLISEEAKRSKILAYITALKKLCNHPKLIYDTIKSNKSG
GSDFDDCLRFFPPELFQGRSGSWTGGGGMWVELSGKMHVLARLLGHLRLKTDDRIVLVSN
YTQTLDLFAQLCRERRYPYVRLDGATSINKRQKLVNQFNDLSRDEFVFLLSSKAGGCGLN
LVGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGL
QKVIQQEQGNTKMQDQGCSLSTEDLRDLFTFHEQVRSEIHENLKCNRCNKDSYMLLDGNS
LESAAIEHNKISTSGEKYYTDIGGFGEISGCVQKMNSSNQQIDQPSEEDLGSWGHHSDPS
TVPDTILQSSAGDEVSFVFTNQIDGKLVPVESMVRLTTPNGMTASGEKQVAEINSPNKPG
WQSSLGKNLKMTGFNLKNSSLKCPTKSRRTSPICLQGLNKTNSSDYKPQTKKLHVASDMS
DDDFV
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgaggccatcgaggagcagatgcgaccgccgtggcagcgacgcggacgaggaggaggtc
gtcgccctctcctccgaccccgacgagtcggagtccgaaccggagggcggggcggaggtg
gacgacgacgaagagtacgtaggggagagcagtgacgcaggcggcgtcgacgacgaagct
gaggaaggagggggaggcagcgacaacggcggcggcgggcggctagttcggggcgcgcgg
cgcggcgctgtggctcctgatgaggagaggaaatcgcagaacgtggatgcgctcgtcagg
ggaaacttggttgtaagaaggcaaccacttattccgcgtatcctttcagtttccgatgca
gcagcaatagctcgaaaaccattcaaacctccgtgtgaaaatggatacagtgaaaataac
gagcatcttgctcggcgcctttcagcccgtaaaagatttgtcccgtggggttcgatgcag
ccatttgcagttataagcaatcttcctcaatcgtctaccattgctagtgatgattcctta
gaaaaggaggagtctcttccacctggcattgagccattgattttgtggcaacccgaggga
tgcgacaaggaaaacaacaattttgctgcaatagaagttgataatttgcttgtacgttac
cttcggccccatcaaagggaaggagttcagtttatgtttgactgcgtctctgggttgcta
agtgatgacggtattgctggatgcattttagctgatgacatgggattgggaaagacttta
cagtcgatagctttactatacacccttctcgctcaaggttttgatggtaagccaatggtt
aaaagagcagtcattgtaacccccacgagcctagttagcaactgggaatccgagataagt
aagtggttaaaaggcaaagtgcagctgcttgccctctgtgaaagcactcgtgccgatgtt
ctttctggaataggaagtttcttaaagcccttaagccgccttcaggtacttatcatatct
tatgagacattccgcatgcattcgtcaaaatttgaaagaccagcaagctgtgaccttctc
atatgtgatgaggctcacaggctgaaaaatgaccagacactaacaaataaggccttagcc
gcgcttccttgtacacggcgtatcttgttgtcaggtaccccaatgcagaatgatttggaa
gagttcttttcaatggtaaactttacaaatccaggagttctgggggatgctgcatatttc
cgcagatattatgaagccccaataatttgcggaagagaacccacagcaactgcagaagaa
aaaaagttgggatctgagagatctggtgagcttagtgcaaaagtaaatcagtttatactg
agacgaacaaatgccctgttgtccaatcacttgccaccaaagattgttgaagtagtgtgc
tgcaagctgactcctttgcagacgacattgtacaaccacttcatacattccaaaaatgtt
aaacgcttgatatctgaagaagcaaagcgatctaaaattttggcatacattactgctctt
aagaaattatgcaaccatccaaagctaatttatgacaccataaaaagtaacaagtcagga
ggttctgattttgatgattgtctacgatttttccctccagaactgtttcaaggaagatct
ggatcatggactggtggaggaggaatgtgggtagaactatctggcaaaatgcatgtgttg
gctagattgctgggccacctccgcctgaaaactgatgatcgtattgtccttgtatcaaat
tatacccagacattagatttatttgcacaattatgccgggaaagaagatacccttatgtt
agacttgatggagcaacatccattaataaaaggcaaaagctggtgaaccaattcaatgat
ctgtctagagatgagtttgtctttctacttagtagcaaggcaggcggttgtgggcttaat
ttggtgggtggaaatcgattggttctctttgatcctgattggaaccctgccaatgataag
caggctgctgctagagtatggagagatggacaaaagaagagagtgtacatttacaggttc
ttgagcactggaaccattgaggaaaaggtatatcagcgccaaatgtcgaaagagggactc
caaaaagttatccaacaggaacaagggaacaccaaaatgcaggatcaaggctgttctctt
tcaacagaagatctgcgtgatctttttacttttcatgaacaagtcaggtctgaaatacat
gaaaatttgaagtgcaaccgttgtaacaaggacagctatatgctgttagatggtaattct
ttggagtcagcagccattgagcacaacaagatttcgacctcaggagaaaaatattatact
gatattggtgggtttggagagatctctggatgtgtgcagaaaatgaatagttcaaatcaa
cagattgaccaaccttctgaagaagatttaggaagttggggccatcattctgatccatca
actgtacccgataccatactccagagttctgctggtgacgaggtttcttttgttttcacc
aatcagattgatgggaaacttgttccagttgaatctatggtgcgattaacaacaccaaat
ggaatgacagctagtggagaaaaacaagtggcggaaataaattctcctaacaaacctgga
tggcaatcttcacttggcaagaatttgaagatgacgggattcaatttgaagaattcatct
ttgaaatgcccaactaaatcaagaaggacatctccaatttgcttgcaagggttgaataaa
accaactcttcagattataaacctcagactaaaaaacttcatgttgcgtctgatatgtct
gatgatgattttgtttga
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