Brachypodium distachyon (stiff brome): 100832937
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Entry
100832937 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100832937
04121 Ubiquitin system [BR:
bdi04121
]
100832937
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100832937
Membrane trafficking [BR:
bdi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100832937
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100832937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zinc_ribbon_9
zf-RING_11
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_10
zf-C3HC4_3
RXLR_WY
zf-RING_5
DUF1272
Motif
Other DBs
NCBI-GeneID:
100832937
NCBI-ProteinID:
XP_003563882
UniProt:
I1GLQ3
LinkDB
All DBs
Position
1:complement(2825987..2828353)
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AA seq
399 aa
AA seq
DB search
MEEDQGVRYWCHSCEEVVVPVEPEKKCPDCDGGFVEDMGSVGFEPSANLRSDTNESDRSL
FWAPLLLGMMGGSSRRSRPRRDMMDSDSDDESRQERIRRALMDTDDEEEEEAEAEEEEED
DSDRELEDLIRRRRSGSSLVRLLQTLRSDIRGLDDIGRDRDRERDRDRERRERERVRVAR
EIERERERTRERNRRRERTESLILINSNNEAIILQGTFGPADNQEDSSNTTAGVSLHDYF
LGPGLDLLLQRLADSDLNRSGTPPAKKESVAALPTVNIQEILGCTVCLEEFEMGTEAKEM
PCQHKFHSHCILPWLELHSSCPICRFQLPTEESKNPCESGSGGGTVSADGDSAESSSSDV
EGTNHDGGSQPGSPMFSGLRALFADPSSSDENIPHASES
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagatcagggagttaggtattggtgccacagctgtgaggaagtggtcgttccc
gttgagccagagaagaagtgcccagattgtgatggcgggtttgtggaagatatggggtct
gtgggctttgagccatcggcaaacctgaggtctgacacaaatgagtctgatcggtccctc
ttttgggccccgttgctgcttgggatgatggggggttcgtcgcggcggtcaaggccccgg
agggatatgatggattctgattctgatgatgagtcccggcaagaaaggatcaggagggcg
ttgatggatactgatgatgaggaggaagaggaggcggaggcagaggaggaagaagaggat
gattccgatcgtgagcttgaagacttgatcaggaggcgaaggagtggctcttcccttgtc
aggctgctccagaccctccgcagtgacataaggggcttggatgacattggcagggacagg
gacagggagagagaccgggatagagaaagaagggagagggaaagggttagagtagccagg
gagatagaaagggagagggagaggactagggagagaaatcgtcggagagaaaggacagaa
agcttaatactgatcaactccaacaatgaggccattattctccaaggaacatttggacct
gctgacaaccaagaggactcaagcaacactactgcaggagtttcacttcatgattacttt
cttgggcctggcctagatcttctcttgcagcgtttggcagatagtgaccttaatcgttct
ggtacaccacctgccaagaaggaatcagtagcagcattgcccactgtgaacatccaggaa
atattgggctgtacagtctgtcttgaggagtttgaaatggggacggaagcaaaggagatg
ccttgccaacacaagtttcactcccactgcatccttccatggctggagctccacagttct
tgcccgatctgtcgatttcagttgcctaccgaggagtcaaagaacccgtgtgaatcaggc
agtggcggtgggacagtgagcgctgatggagatagtgctgagtcaagtagtagtgatgta
gaaggtactaaccatgatggaggcagccagcctggcagtcctatgttctctggtttgagg
gcactcttcgcagatccatcctcatctgatgaaaatattccacatgcttccgagagctga
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