Brachypodium distachyon (stiff brome): 100833671
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Entry
100833671 CDS
T01717
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100833671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100833671
03036 Chromosome and associated proteins [BR:
bdi03036
]
100833671
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100833671
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100833671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
100833671
NCBI-ProteinID:
XP_014754864
UniProt:
A0A0Q3ICK6
LinkDB
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Position
2:complement(7273365..7276942)
Genome browser
AA seq
916 aa
AA seq
DB search
MFGSTNPFGQSSGSAFGQTSSNPFGAQSAFGQTSAPANNPFGSPTPAFGAQTGTASPFGA
ASTSPFGQTSAPAFGATSTPAFGAASTGGFGQPSTPAFGTPSSSPFGSSTPAFGASPTPA
FGAASSNFGSGSLFGQKPSFGGFGSSPSQSSPFGSTFQQTQPTFGNSTFGATTTPAFGTT
TTPSFGATATPAFGSTSTSLFGASSTPAFGSTPFGSNTTPSFGSSSTTAFGVSSAPAFGA
STTPSFGTSTSAFSFGSSPAFGQTAPATGSTPFGTNPSPFGAQTSPFGVQTAAPAFGQGP
HGNQSGGSRIQPYVQTPDADSATSGSQPAAKLDSISAMPAYKDKSHEELRWEDYQRGDKG
GPNTSVAPVANSFASPQPSFQTNPPTTGNLFAKSSPFTSGGFGAPSNPFSAPTANQFAQT
SSSAFSANTSPSLFANTTPSLFNTSSTSTNPFGTGLSIGNNSQSAGLFQSSPAIGQQPFG
QQSSTSAFSAGIFNTSNLGMTGGLFSSSSSPFLTSTFQQSAPGQTPSLFSFQPQTQQASA
GGFPAVSNTTNLVPFGQQTTSQSNMVMQPALVLNPFGTLPAMPQMSIGNGGSSPSIQYGI
SSMPVAEKPLASRTLSMVVPRHLSQRRMKLLPRKYNPTSDGKVPFFADDEESSATPKADA
FLIPRENPRSLIIRPIDQWPSRNVVDRQSILSDSADPNKQTDALVRRERNSAFMSPTQSG
PMGNGMYRDDHHASSELEAGTRRVNGASIEKLMPKLSQADYFTEPSLEELAAKERAEPGY
CCRVRDFVVGHQAYGSIKFLGETDIRGLDLESIVEFNNREVIVYKDDSKKPPVGEGLNKA
AVVTLLNIKCVNRKTGDQYTEGPRVDKYRDMLVKKAEEQGAEFISFDASKGEWKFRVKHF
SSYGFGEAEAGAFDSL
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctccaccaatccattcgggcagtcgtccggtagcgcgttcgggcagacatca
agcaacccattcggggcccaatcggcgttcggccagaccagcgcccccgccaacaacccc
ttcggcagcccgacccccgccttcggggcgcagaccgggaccgcctcgccgttcggcgct
gcctccaccagcccctttggccagacatccgccccggctttcggggccacatccacccct
gcgtttggcgccgcgtcgactggcggctttggccagccatccacgccggcgttcggcacc
ccgtcgtcctccccgttcgggagctccacgcccgcctttggcgcatcgccaacccctgcg
ttcggcgccgcatcctccaactttggcagcggttctttgtttggacaaaagccaagtttt
gggggttttggatcatcacctagccagtctagtccctttggtagcacattccagcaaacg
caaccaacatttggcaacagcacttttggcgccacaactacgccggcctttggcaccacg
acaacgccatcatttggtgccacagccaccccagcatttggctcaacatcaacatcctta
tttggtgcttccagcaccccagcatttggttccacgccgtttggttcaaacacaactcct
agttttggatcttcaagtacaacagcatttggtgtgagtagtgctccagcttttggagct
tcaactacaccttcatttggcacatcaacaagtgcttttagttttggttcatcaccagct
tttggacaaacagcacctgcaactggtagcactccctttggaacaaatccttcacctttt
ggagcacaaacttctccatttggcgtgcagactgcagcaccggcatttgggcaaggtccg
catggtaatcaatctggaggaagcagaatacagccttatgtgcaaacaccagatgctgac
agtgctacaagtggtagtcagcctgctgcaaaacttgattccatatcagccatgcctgca
tacaaagataagagtcatgaagaattaaggtgggaagattaccagcgtggagacaaaggt
ggaccaaacacttctgtagctccagtggcaaatagctttgcatctccacagccgagtttt
caaacaaatccaccaacaacagggaatctatttgctaagtcctctccctttacatcaggt
ggttttggtgctccttcaaacccattttcggcaccgacagctaatcaatttgcacaaaca
agcagttctgcattttcagcaaacacttcgccatctctgtttgcaaataccactccgtcg
ctgttcaacacgtcatcgacaagcactaatccatttggtactggcttatccatcggtaat
aactcgcaatcagctgggctgtttcagtcttcccctgcaattgggcaacagccatttggc
cagcaatcaagcacttcagctttctctgctggtatattcaacacgtccaaccttggaatg
actggagggttgtttagcagcagttcttcaccttttctaacatcaacgtttcaacaatct
gcccctggtcaaactccaagcttgttctcattccaacctcagacacaacaagcttctgca
ggtggattccctgctgtttccaacacgacaaatttggtcccatttggacagcaaaccact
agccagtccaatatggtcatgcagccggcccttgttttaaatcccttcgggacacttcca
gcaatgcctcagatgtccattgggaatggtggatcctcgccttctatccaatatggaata
tcaagtatgccggttgctgagaagcctcttgcaagcagaacattatccatggtggttcct
aggcatttgtcacagagaaggatgaaattgctgccacggaaatataatccgacatctgat
ggcaaggttccattctttgctgatgatgaagagtcttctgcaacaccaaaagcggatgct
tttctaatccctagagagaaccctagaagtctgataatccgtccaatcgatcaatggcct
tcacgtaatgtggttgacaggcaatcaattctgagcgattcagctgatccaaacaaacaa
acagatgctttggttaggagggagcgcaatagcgctttcatgtcaccaactcagtctggt
ccaatgggaaatggcatgtaccgtgatgaccaccatgcatcaagtgagcttgaggctggg
acacggcgagtgaatggtgcttctattgaaaagctcatgcctaagctctcccaggcagat
tacttcacggaacctagtctagaggagcttgctgccaaggagcgtgctgaaccaggctac
tgctgtcgggtgagagactttgttgttggacatcaagcctatggtagcatcaaattcttg
ggagaaactgacataaggggccttgatctggagtcgattgtggaatttaataaccgcgaa
gtgattgtatacaaggacgatagcaagaagccgccggtcggtgagggtctgaacaaagct
gcagtggtgactcttttgaacatcaagtgtgttaacaggaagacaggcgatcagtatacg
gagggtccgagggtagacaagtacagggacatgctggtgaagaaagcagaggagcagggt
gcggagttcatctcatttgatgcttctaagggtgagtggaagttccgagtgaagcatttc
agctcctacgggtttggtgaagctgaagcaggcgcatttgattccttgtag
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