Brachypodium distachyon (stiff brome): 100835462
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Entry
100835462 CDS
T01717
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100835462
Spliceosome [BR:
bdi03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
100835462
Other components
Complex C specific factors
100835462
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
100835462
NCBI-ProteinID:
XP_003577528
UniProt:
I1IGJ7
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Position
4:complement(1330320..1333441)
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AA seq
853 aa
AA seq
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MEEDAEGMDRLDMEGDFVGGRCGRDGEFYYQSRRERAPQTRDDALYGVFAEGDSDYDSEE
DEASRRRRRRKRRRDESEPDLTRPVQFVSTGNFVSSEKKPVEEEEEEQRPGLGNAAASSS
AAAAVAVEDEEEQDEYIDLPMGFGQRIAEGARARRVEKEREREAAARRRNAASVGAGSGS
GRPPPAPGSLESNTKVAKMMAMMGYKTGSGLGKNAQGITAPVETTLRPKNAGLGSVEGFK
EPKPFTSKENLPPPPPPPPSAKKEKQRWSKKASVRKDQVLTKNELLAMRAEQEQDEQPTL
VQKVIDMRGPQARVLTDLKGLSDEQEMEANDVPMPELQYNVRLLVDEAKADIVRLDGRLR
REQEKVASLVREKEKVAKQEALQKRQLQVMETIAGVLEQVRVDDTAGLLTLGGLLKTFQE
LKVQYDEEFKMCSVAWIACRFAHPLLIRVFQGWQPLQNPLFGLEVMSSWKDLLQGDQPYD
FSDATDSMAPYAQLVSEVILPAVRISGTNSWEARDPEPMLRFLESWERLLPPIVLHSILE
HVIMPKLTAAVESWDPRREKVPIHVWVHPWLPTLGQRIETLCHSIRYKLSSVLHVWQAHD
ASAYAVLSPWKGVFDPASWEDLIVRYIIPKLKVALQEFQINPASQRFDQFNWVMIWASAV
PVHHMVHMLEVDFFSKWQQVLYHWLCSQNPDFNEIMNWYKGWKGLFPPELLANERIRMLL
TAGLDMMNQAAEGLEVVQPGARENVGYLRATEKRQFDAAQQASQSYHPVPGAAMADMSFK
ESIQAYAMEQGLLFMPRVGKFYNGMPVYEFGTVSVCIDSVKRLLYAQPQEGIERWSAVSL
TQLLEMNRMARPC
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgcggaggggatggaccggctcgacatggagggggacttcgtgggcggg
cggtgcggccgggacggcgagttctactaccagagccgccgcgagcgcgcgccccagacc
cgtgacgacgcgctctacggcgtgttcgcggagggggactccgactacgactccgaggag
gacgaggcgtcgcgccggcgccggcggcgcaagcgccggagggacgagtccgagcccgac
ctcaccaggcccgtgcagttcgtgtctactggtaacttcgtgtcctcggagaagaagccc
gtggaggaggaagaggaggagcagagacccgggcttgggaacgctgcggcctcctcgtct
gctgccgctgctgtggccgttgaggatgaggaggagcaggatgagtacattgacctgccc
atggggttcgggcagaggatcgctgagggtgcccgggcaaggcgggtggagaaggagcgg
gagcgtgaggcggccgcgcgccgccgcaatgcggcgtcggtaggggcggggtcgggatct
ggaaggccaccgccggcccctgggagcctggagtctaacacgaaggttgctaagatgatg
gctatgatggggtacaagactggatcgggccttggcaagaatgctcaggggatcactgcg
ccggtggagaccaccttgcgccccaagaatgccggacttggtagcgttgaggggtttaag
gagcccaagcccttcacttccaaggagaacttgccacccccgcctcctcctccgccgtct
gccaagaaggaaaagcaacggtggtccaagaaggctagcgtgaggaaggatcaggtcttg
acaaagaatgagttgctggcaatgcgtgccgagcaggaacaggatgagcagcccacgctt
gtccagaaggtgattgacatgcgagggcctcaagctcgtgtgctgacagacttgaagggg
ctcagtgatgaacaggagatggaggcaaatgatgtgccaatgccagagttgcagtacaat
gtgcggctgcttgttgatgaggctaaggccgatattgtcaggttggatggacggctgcgg
cgggagcaggagaaagtggctagtttggtgcgagagaaggagaaagtagcaaagcaggag
gctttgcagaaacgccagctgcaggttatggagacaattgcaggtgtgctcgagcaggtc
cgggtggatgatactgctggtttgctcactctgggagggttgcttaagaccttccaggaa
ctgaaggtgcagtatgacgaggagttcaaaatgtgcagcgttgcatggattgcttgccga
ttcgcgcacccactacttatccgggtattccaagggtggcagccactgcagaatccgttg
tttggcttggaggtcatgtcatcgtggaaggatttgctgcagggagaccagccatatgat
ttctcagatgctactgactcaatggctccatatgcacagctggtcagtgaggtgatccta
ccagctgtgaggatatcaggaaccaattcatgggaggctagggatccagaaccaatgctc
cgctttctcgagtcatgggaacggttgctgcctcctattgtgctccattcaattttggag
catgtgatcatgccaaagctgacagctgcagtcgaatcttgggacccacgcagggagaag
gtaccaatccatgtatgggtacatccatggttaccgactcttgggcaaaggatagagacc
ttgtgtcactctatcaggtacaagctgagtagtgtcctccatgtatggcaagctcatgat
gcatcggcttatgctgtgctgtctccatggaagggtgtgtttgatccagcaagttgggaa
gacttgattgtgcgctatatcattcctaaactcaaagtagcacttcaggagttccagatc
aacccagcaagccagaggttcgaccagtttaactgggtcatgatctgggcttctgctgtc
ccggtacaccatatggttcatatgttggaagttgatttctttagcaagtggcagcaggtc
ctctaccattggctgtgttcacagaatcctgatttcaatgagatcatgaactggtacaaa
ggctggaaggggcttttcccaccagagttactcgccaatgaacggatacggatgcttcta
acagctggtctcgacatgatgaatcaagctgctgaaggacttgaggtggtacagcctggg
gcaagggagaatgtgggctacttgagagcaacagagaagcggcaatttgatgcagcacag
caagcatcgcaatcttaccatccagtgccaggagcagccatggcagatatgagcttcaag
gagtctattcaggcatatgcgatggaacaaggtttgctgtttatgcctagagttggcaaa
ttctataacggcatgccagtgtatgaatttggcacagtgagtgtttgcatagactctgtg
aagcgactactgtatgcacaacctcaagagggaattgaaagatggagtgctgtttctctt
acgcaattgctggaaatgaaccggatggcaagaccatgctag
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