Brachypodium distachyon (stiff brome): 100838395
Help
Entry
100838395 CDS
T01717
Name
(RefSeq) high mobility group B protein 6
KO
K09273
upstream-binding transcription factor
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bdi03000
]
100838395
03021 Transcription machinery [BR:
bdi03021
]
100838395
Transcription factors [BR:
bdi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
100838395
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
100838395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
CHDNT
KRAB
Motif
Other DBs
NCBI-GeneID:
100838395
NCBI-ProteinID:
XP_003571177
UniProt:
I1HZB8
LinkDB
All DBs
Position
3:complement(7867460..7869992)
Genome browser
AA seq
537 aa
AA seq
DB search
MATVAAGNQRSALGRKALSTVLDNDANISAGKADVTAAALSPLQKTKRVSSKRGKAAAPS
AAAAGQALDADADVSAGKADVATAAPASAQKAKRASSKNGKGKAAAAPSMADELTELQGM
LERLRLEKEKAEEMVRERDEVIRKKEEEIETKGKQQERLQAELKKMQRVKEFKPTMNLPL
VKSLLDKDQDGDDKGKKKKKGKGKSGNERKKPCPAYLLWCKDQWAEIKKENSDADFKEVS
NALGAKWKTISAEEKQPYEERYRQEKEAYLQVVGQEKREAEAMKLFEEEQMRWTAKELLE
QYLKFRQEADGSDKKAKKKNKKEKDPSKPKQPMSAYFVYSQERRAALVAEKKNVPEIGKI
TGEEWKSMTDAQKAPYEEVASKQKEEYHKQMEVYKQKKLEETQSLEKEEEEQKKVMKQEA
LQLLKKKEKTDNIIKKTKEKRQKKKQENVDPNRPKKPASSFLLFSKEARKQLVEERPGVN
NSTINALISVKWKELSGTEKKTWSEKAAEGMAAYKREMEEYTNAHTSSPSSCSSSSA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtcgcagcggggaaccagaggagcgccctgggccgcaaggcgctctcgacg
gtgctcgacaacgacgccaacatctccgccggcaaggccgacgtcaccgcggcagccctc
tcgccgctgcagaagacgaaacgggtgtcgtccaagaggggcaaagcggcagcgccttcg
gcggccgccgccggtcaggcgcttgacgccgacgccgacgtctcggccgggaaggctgat
gtcgccacggcggcacccgcctcggcccagaaggccaagagggcgtcctccaagaacggc
aagggtaaggcggcagcggcgccgtcgatggccgacgagctgacggagctgcaggggatg
ctggagagactgcgcctggagaaggagaaggcggaggagatggtgcgggagcgggacgag
gtcatccggaagaaggaggaggagatcgagaccaagggcaagcagcaggagcgcctccag
gccgagctcaagaagatgcagcgcgtcaaggagttcaagcccaccatgaaccttccgctt
gtgaagtctttgctcgacaaggaccaggacggagatgacaagggcaagaagaagaagaag
ggaaagggcaagtccggcaacgagaggaagaagccatgcccggcgtatctcctgtggtgc
aaagatcagtgggctgagatcaagaaggagaactcggatgcagatttcaaggaggtgagc
aacgctctgggtgctaaatggaagaccatcagcgccgaggagaagcagccgtacgaggag
aggtacaggcaggagaaggaggcctacctgcaggtggttgggcaggagaaacgtgaggcc
gaggcgatgaagctattcgaagaggagcagatgcgttggactgcaaaggagctgcttgag
cagtacctcaagttcaggcaggaggccgatggcagcgacaagaaggccaagaagaagaac
aagaaggagaaggacccctccaagccgaagcagcccatgtcggcgtacttcgtctactcg
caggagaggcgcgctgcactggtcgccgagaagaagaatgtgcctgagattggtaagatt
actggggaggagtggaagagcatgacggatgctcagaaggctccctatgaggaggtcgcg
agcaagcagaaggaagagtaccataagcagatggaggtgtacaagcagaagaagcttgag
gaaacccagagcttggagaaggaagaagaggagcagaagaaagttatgaagcaggaggct
ctgcaacttctcaagaagaaggagaagacagacaacataatcaagaaaaccaaagaaaag
cgtcagaagaagaagcaggagaacgtcgacccgaacaggcccaagaagcctgcatcttcc
ttcctgctcttcagcaaggaggcgaggaagcagctagtggaggagcgccccggcgtgaac
aactccacgatcaacgcgctcatctcggtgaaatggaaggagctgagcggcactgagaag
aagacgtggagtgagaaggcagcggaagggatggcggcgtataagagggagatggaggaa
tacaccaacgctcacacctcctctccctcctcctgctcgtcctcttcggcttga
DBGET
integrated database retrieval system