Brachypodium distachyon (stiff brome): 100839358
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Entry
100839358 CDS
T01717
Name
(RefSeq) synaptonemal complex protein ZEP1
Organism
bdi
Brachypodium distachyon (stiff brome)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SKA2
Motif
Other DBs
NCBI-GeneID:
100839358
NCBI-ProteinID:
XP_010239979
UniProt:
I1IYC9
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Position
5:15610294..15618691
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AA seq
861 aa
AA seq
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MQKLGLVGLRSLEGFRSLAGPTSMAAKATNPKPSSDAGGSTYGSFANLKITAEKLVKEQA
SVKTDLEMAHTKLRRATEQINLLEAKLQQAVNENVKLKVKQTEDSKLWQGLDSKVSSTKT
LCDQLTETLQQLASQAERAEEDKKFFEEMLGKNSKALDELNCLLHDSSIKLERAEANIMS
GKEEMLRIKQEKEEMDRSYKEQLDAIGTTIKGKDSLIKQLEGSVEENKARLLCAESRLQC
VEQELKLKQDVCICLKENLAGVEREKNDLELRNRAYCLEVERLRKDNKDVNELLSSFVAK
VTELDKEHASMSSHVSRLLSSFEKYCGMVQEEKMLSTRSAKDKFENLQNQFVDLTSENSI
LKTEIGELKSRITELLKTQEIVMVQHVEECQAAEDKIRRLESEAEISASNVSHLEKLSSE
LERRVQKLLEDSSLSQNHKEELLQKILKLESDNQELLGRVQSILDEKSNDTESLQGEIAK
RDQQVDTLENQISELRASLDEKEQLYVCSVEREKGLEEQKLQVQASLAATECQLTEAKKQ
YDIMLEGKQIELSKHLKELSHRNDQAINDIRKKYESEKVEIINAEKEKAEKLTREMENEC
NEKILENKRESERCLMHLKEEHVAVVTRIQQDNEHKESTLRAYHKEELQRVHSQAENELR
ERLSSLRKEHEAQINSLNIQHEEDCQKLQDELELQKSKEEKQRALLQLQWKVMGENQQVD
QEVSSKKRRDPYVRKESQIQLAGPETKRKDVSISGVIQSPISNMLGKVEKGTQDVSNHRK
VTHHEYEVETANGRITKRRKTKSTVMFGEPNTQKSLRNTAEKDVTKTRKVVAGSRPHPAN
IGELFSEGSLNPYAEDPYAFG
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagcttgggctcgtggggcttaggagcctcgaggggttccgatcgctcgctgga
cccacttcgatggctgcgaaagccacgaaccccaagccctcgtcggatgctggaggtagc
acgtacgggagcttcgccaatcttaagatcacagcagagaaattagtcaaggagcaggct
tcagtgaagactgatctagagatggcgcataccaagctgagaagagcaacagaacagata
aatctgttagaagcaaaacttcaacaagctgtcaatgaaaatgtgaagcttaaggtgaag
cagactgaagattcgaagctctggcagggattagattcaaaagtttcttcaacaaagacc
ctgtgcgatcaattgactgaaactctgcagcagttagcaagccaggcagaaagagctgag
gaagataagaagttttttgaggagatgcttgggaagaactccaaagctttagatgaatta
aactgcttgctgcatgattcctcgataaaactggaacgtgcagaagcgaatatcatgtca
ggcaaagaggagatgttgcggatcaaacaagagaaagaagaaatggatcggagctacaag
gaacagcttgatgcaattggtaccaccataaagggaaaagattctctcatcaaacaactg
gagggttcagttgaagaaaataaagcccgtttgttgtgtgctgaatcccgcttgcaatgc
gtggagcaagagttgaagctaaaacaagatgtatgtatttgcctgaaagaaaaccttgca
ggtgttgaaagagaaaaaaatgacttggagcttaggaaccgggcatattgtctggaagtt
gaaagattacgcaaggacaataaggatgttaatgaattgcttagcagttttgtggctaaa
gtaactgagctagataaagagcacgcatcaatgtcaagtcatgtatctaggttgctctct
tcattcgagaagtactgtggaatggtccaagaggagaaaatgctttcaacaagatctgct
aaggataaatttgaaaatcttcaaaaccagtttgtagatttgacatcagaaaacagcatc
ctcaaaactgaaattggggaactgaagtccagaatcacagagttactgaaaactcaagaa
attgttatggttcaacatgtagaagaatgccaagcggctgaagataaaatcagaagattg
gagtctgaagcagaaatatctgcctccaatgttagtcacttagaaaagttatcttctgaa
ctagaaaggagagttcaaaagttactggaggattctagcctttctcaaaaccacaaggaa
gagttgttacagaagattttgaagctggaatcagataatcaagagcttctaggcagagtg
cagtcaattttggatgagaaatctaatgatacagaatctctgcaaggcgagatagctaag
cgtgaccagcaggttgacacacttgaaaatcagattagcgaactccgcgcttctcttgat
gagaaggaacagttgtatgtttgttctgtagaaagagaaaagggtttggaggaacagaag
ttacaggtccaagcatcacttgctgcaactgaatgccaacttaccgaggccaaaaagcag
tatgatatcatgcttgagggtaaacagatagagctatccaagcatttgaaagagttatct
cacagaaatgatcaggcaatcaatgacatccgtaagaaatatgaatccgaaaaggtagaa
attattaatgctgaaaaagagaaggcagaaaagctcacaagggaaatggagaacgaatgt
aatgaaaagatattagagaacaagcgagaatccgagaggtgtttgatgcatcttaaggag
gaacatgtcgcagtggtgacaagaattcaacaggataatgagcataaggaatcaactctt
cgagcttatcacaaagaagaattacagcgcgttcattctcaggcagagaatgaattaagg
gagaggctgtcgtcactccgaaaagagcatgaagctcaaataaactcactgaatatacag
catgaggaagattgccagaaacttcaggatgaacttgagcttcagaagtcaaaggaggag
aagcaaagagccctattacagttacagtggaaagttatgggtgaaaatcaacaagttgat
caagaagtgagctctaaaaagaggagagatccatatgtgagaaaagaaagccagattcaa
ttggcaggtcctgagaccaaacgaaaggatgtaagcatatctggagttatacaatcgcca
atttcgaacatgctgggaaaggtagaaaaaggaactcaagatgtttctaatcacagaaag
gtaacacaccatgaatatgaagtggagacagcaaatggaagaatcacaaaacgcaggaaa
actaagagcactgttatgtttggggaaccaaacactcagaagtcattgcgtaatactgct
gagaaggatgttacaaaaacaagaaaggttgttgcaggatcacgtccccatcctgcaaac
attggtgaattgttttctgagggctccttgaatccatatgctgaagacccttatgcattt
ggctag
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