Brachypodium distachyon (stiff brome): 100839727
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Entry
100839727 CDS
T01717
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100839727
Spliceosome [BR:
bdi03041
]
Common components
Common spliceosomal components
General mRNP proteins
100839727
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
100839727
NCBI-ProteinID:
XP_003573971
UniProt:
I1I499
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All DBs
Position
3:28159788..28166158
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AA seq
597 aa
AA seq
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MDFDEYDYLEKAVEPPVPSTNGAGEKDRSSRRRSSTGGGGGRDQDERGSKRPRSGEDRER
HRSSREHRDRDDGKEKDGSRDREKVREKDEGRDREKVREKDGGRSREKVREKDEGRDPEK
VREKDEGRDREKIREKDSSRDRDKVREKERDGRDRLMERENGRERRSRSRSERRRGEEEE
MVRELQRERERSDRHRDYRDRDFRRKKDDGTEPEVDPERDQRTVFAFQLSLKADERDVYE
FFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALTGQPLLGQAVMVKPSEAE
KNLAQSNAASGGAASGGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCK
GFGFIQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDQGGVQLGGTTTGDLDDDEGGGLA
LNASSRALLMRKLDRSGTATSLTGGIGAPGLNTSVGLPAASVFGAPLAAASLAPTIPTVG
AVPGAPLPVISQSADIGTPTEFLLLKNMFDPAVETDPDFDLDIRDDVQEECSKFGVVKHI
FVDKHTAGFVYLHFDSSTAATSAQRSLHGRWFAGKMITATFMTAQQYEMKFPDRSAV
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgactacttggagaaggcggtcgagcccccagtcccgtcaacc
aacggcgccggcgagaaggaccgcagctcgcgccgccgctcctcaaccggcggcggcggc
ggccgcgaccaggacgagcgcggatcgaaacgccctcgctcgggagaagaccgcgagcgg
caccgcagcagccgcgagcaccgggaccgggatgacgggaaggagaaggacgggagccgc
gaccgcgagaaggtaagggagaaggacgagggccgcgaccgcgagaaggttagggagaag
gatgggggacgcagccgcgagaaggttagggagaaggatgaggggcgtgaccctgagaag
gttagagaaaaggatgagggtcgggaccgagagaagatcagagagaaggatagcagccgc
gaccgtgataaggttagggaaaaggagcgagacggcagggacaggcttatggagagggag
aacggaagggaacgtaggagccgtagccgctcagagcgacgccgcggggaggaggaggag
atggtaagggagcttcaacgggagcgcgaacgcagcgaccgacaccgtgactaccgagac
cgtgatttcaggcgcaagaaagatgatggtacagaaccggaagttgaccccgaaagagat
caaaggactgtatttgccttccagctatctttgaaggccgatgaaagagatgtctatgag
ttcttctcaagagcagggaaggttcgtgatgttcgccttattatggaccgaaactcacgg
cgttccaaaggagttgggtacatcgagttctatgatgttatgtctgttccaatggcaata
gctctaaccggtcagccacttcttgggcaagcagtgatggttaagccatcagaggccgaa
aagaacttagcccagtcaaatgcggcatcaggtggagcagcttcaggtggagcaagaaag
ttgtatgttggcaaccttcattccaatatcaccgaggaccaattgagacaggtctttgaa
ccatttgggcaagtggagcttgtccagctgcctgtagatccacttactgggctatgcaaa
ggttttggtttcattcagtttgcacggcttgaagatgcaaaagctgctcagagtttgaac
ggccagctcgacattgctgggagagtaatcaaggtctccgctgttactgatcagggtggt
gtgcaacttggtggcacaaccactggagatttagatgatgacgaaggtggagggttggca
ttaaatgcaagctctagagcccttctgatgcggaaattggaccggagtggcactgcaacc
agcttaactggtggcattggtgctcctggtttgaacacgtctgttggattgcctgctgca
tcagtttttggtgctcctctggcagctgcttctcttgcacccacaatacctactgttgga
gctgttccaggagcacctcttcctgttatctctcagtctgctgatattgggacacctact
gaattcctgttgctgaagaacatgttcgacccagcagtggagacggatcctgattttgat
ttggatattagagatgatgtccaagaagaatgttcaaagtttggtgtagtgaagcatatt
tttgttgacaaacatactgctggctttgtgtacctgcattttgacagctcaacagcagca
acaagtgcacaacgatcacttcatggtagatggtttgcaggaaagatgatcacggcaacc
tttatgactgcccagcaatatgaaatgaagttcccagaccgctcagcagtgtga
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