Brachypodium distachyon (stiff brome): 100843380
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Entry
100843380 CDS
T01717
Name
(RefSeq) golgin subfamily A member 4
Organism
bdi
Brachypodium distachyon (stiff brome)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK
ERM_helical
ATG16
Motif
Other DBs
NCBI-GeneID:
100843380
NCBI-ProteinID:
XP_003574651
UniProt:
I1HX68
LinkDB
All DBs
Position
3:2537689..2548311
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AA seq
2716 aa
AA seq
DB search
MDHRGRGGGGGGGGRGGGDKNRTDLLAAGRKKLQQFRKKKEKKGPGKKAEADAEGEAKAG
GANAEEAVPEPKSPVGLKFLAGDSGSSHSTPFEEAAKSHEEQCNGQGPDTAEPSTVENPD
VTPVLENVDGCDVQNIGISEQGGSEHNSSRPGDGEESVVQASSSDVGFNLVGAQPREVDS
EEPLDRFSESMEPQISSHSDIADDGINQVGEHEVQMDPVERPDSSDLKENMEVPIPSQDL
AAGNNINILEGAQELEVGVSERPSDGNMQQDEVVHEEVLALAASHEIPESTGRGDADEEA
DGVGKEAVQEVVGTSISDATQEAVATDELNLAVEKVDPALFVGAVPQGVMPHHLEYIQRH
LYVTTLSRDFLQLQLNEDVDVNPDITPYSDEILKLQVLLKESEDCKVALSQEIQQCRHEL
SDLNTVKGELQQIVASQKEEINSSNSKCEQLEIELQYSKENTQQTLRDLADCQILLEAVQ
KENMELTTNLGSEKEARKEAEEQREYLSSENKNLLSKLSALELDLASMKEAMNAGSSRCE
SLEVELCSSKENMEQTLTELANCRAFLEESQKDNLELSKFFAVEKETNMKLKEDNVRLLN
EKEMLLSDLSELNNKLHLSYAKHKQLESHVRDMETDIEQLTEQLIEESMYATNSFDIYQS
AMKELDAKCNVVLGQAQTVVHQENEHHLDSSEITVENSERTITSPAFVGDGNNQYSHPLF
SENNSCDSTALQSLKGHLEIAKGELYELQKLVHRISSRSDGRVLVSKLIQSFETKENQED
PGMSEGEHDDLKKLTQEMIFSLVEKLKSMTSDLAKTEKYVVELCDKIELSSKSEVQHEAE
RQHTAILEAKMDGLAEKLNNYNNTIDQLHIQLANVQLDADNHAGKLTNQATLLDHDVTER
IFILEKERASLSNLLIEITNKLSSLRSNEFSNDLGENEGLGSCILNSLDLAAKSIQSLQD
KLEAAQSENANLNTSLLEIKKAHSDVQERSEKASGMVKHMCDTLQELLRDSLGNSDEAVA
GYNAEELIEVLFSHVGGIVEHLKNLLHDRHSLQANNANLESRLLSKCEEVEELSLRCSSL
TKNMDAICLLNEELNLVSSNKSAAQDELHSRCLAIAVNMMHYSASNTSIVIPLMSNSGEA
EAFSKDQHILTTLLPCIEEGVASYNEKLENAVEEIHLSKICLQNAHMFDQISFDKWALPL
PALLKEEIVPKVCELQGQIDQLSALNIQLETEAPVLKDGLKKLDEAIQTSHAELQKRSSE
LEQSEQKLSSVKEKLGIAVAKGKGLIVQRDSLKQSLLEKSGELEKLSQELQSKDALVKEL
EAKLKSYTEADRIEALESELSYIRNSATALRDSFLLKDSVLQKIEEVLEDLDLPEYFHSR
DIVEKIELLTKMAVGASFTMPDGDKRSSVDGHSESGLAMDSINDEQISNSNPGSDDIKIK
YDELNRRFYELAEHNNMLEQSLVERNSILQKWEEVLGQVSVPPQFRMLEPEDRITWLGNR
LSEVENERDTMHLKIEHLEDSSEMLITDLEESHKRISELSAEVVAMKAEKDFFSQSLEKL
RFEFLGLSEKAVQDEFVRDNLRKDLAELQEKLAEKAKESKHYHDMEIEVYKLLDLVRNVL
QDGTGSNAEIPAGDVVLQLGELLRKVLDHYASLLSESTLGNAAGKEIHLEETRPFNDATS
ETSRDDKENALNIFSSELEHARSSLALAEQQRNEALEKAESLILEVETLHAEINQLQLVG
VEQTQKYQLLVLELESVGKQRDDLIEKLNQSTELEHSLSSLALAEQLRDDAVQKAESLVL
EVETLQAQINQLQEGGVEQTQKYQSLVLELESIGKLRDDLQEKLNQEEQKSASLREKLNI
AVRKGKGLVQHRDSLKQTIEEMNAVVEKLKNERNQLTESLESEKSLLMGRLTENEKSLHD
TTQYLSRLLNALGTVDIAREFDADPIAKIEKIAQFYIDLQAIAVSSQNEVKKSKRATELL
LAELNEAHERVDNLQEELVKAEAALSESSKKNHVIESARADAVRQLEHIMHLQALAERKQ
IDHLKELNSTSGELKEVCLELSHRLVSAFSKDLDLIYYVESFMKSSGKWMDGTNLVDIPI
TSNHLLSNSKSSKKAHIPNSPLEFTVDDTHESQLLHHLAITCHAVSDCVKDCNDLKRNID
EHGFSVDQKATELFDVMSNLQNRFTSQNKELESSRENVVELQSKINEKEEECLSMRRNMS
LLYEACTSSVSEIEGMTGMESGNRSYFVGQNHLSSYDHIKSVVDQLGAAVKTTRYSNEGN
TKELKATVLELQQELQEKDVQISTISSELASQIRDAESSAKQLSVELEDARIEVCNLEKH
VELLLNQKKALETQVSELKDLETVASEQHGRLKELTDELTRKDQEIEGLMQALDEEEKEL
EVLENKSNNLEQMLQDKEFALKSLEVSRTKALTKLATTVDKFDELHSLSESLLVEVESLQ
SQLQERDSEISFLRHEVTRSTNELLTTEDINKKYLSQINDFIKWSETALLQFGVHCDIAD
DYDCTQLPVYMDMLDKKIGSLISESGDLRVAVQSKDSSLLAERTKMEELSRKSEALAASL
SQKDSQIGLLRRDRTLGQASRSINLPGTSEIEQMNDKVSPAAVTQIRGARKVNNDQVAID
VEMHKDKPLDDEDDDKAHGFKSLTMSHFVPKFTRPISDRIDGMWVSGDRLLMRQPTLRVG
ILIYWIALHALLASFI
NT seq
8151 nt
NT seq
+upstream
nt +downstream
nt
atggatcacaggggtcgcggcggtggcggcggagggggaggccgcggaggcggggacaag
aaccgcaccgatctcctcgctgccgggcgcaagaagctgcagcagttcaggaagaagaag
gagaagaagggtcctgggaagaaagccgaagcggatgccgaaggggaggcgaaggctggc
ggggccaacgcagaggaggccgtgcctgaacccaagtctcctgttgggttgaagtttcta
gccggggatagtggcagcagccatagcacgccatttgaggaagcggcaaagtcgcatgag
gaacaatgcaatggccaggggcctgatactgctgagccaagcactgtagagaatccagat
gttacgcccgtgcttgagaatgttgatggttgtgatgtgcagaatatcggcattagtgag
caggggggttcggagcataatagctctagaccaggcgatggcgaagaatccgtagttcag
gcttcgagttcagatgttggttttaatcttgtaggagctcagccacgggaggtggacagt
gaagaaccactagatcgcttttcggaaagcatggagccacagatttcttctcacagtgac
atagctgatgatggtatcaaccaagtaggggaacatgaggtgcagatggatcctgttgag
aggccagacagttctgacttgaaagaaaatatggaggtgccaattccatctcaagacctc
gcagctggtaataatattaatattttggaaggagctcaagaactggaggtgggtgtttct
gagaggccttctgatggcaacatgcaacaagatgaggttgtgcatgaagaagtgttggct
ctcgcagcttcacatgaaattcctgagagtactggaagaggagacgctgacgaggaagct
gacggagtgggcaaagaagctgttcaagaagttgtaggcacaagtatatcagatgctaca
caggaggctgtcgctacagatgaattgaatttagctgttgaaaaggttgatccagcttta
tttgttggggctgtacctcaaggcgtcatgccgcatcatcttgagtatattcagaggcat
ctgtatgttacaaccctgtcaagggattttctccagttgcagctaaatgaggatgtagac
gtgaatccagatattacaccttattctgatgaaattctcaagctccaggtactactgaaa
gaatctgaagattgcaaagtagcactcagccaagagattcagcaatgtagacatgagctc
tccgacttgaatactgtaaagggtgaacttcaacaaattgtggcttctcagaaagaggaa
atcaactctagcaacagcaaatgtgaacagctggagattgaattacagtactccaaggag
aacacgcaacaaaccctcagagatttagctgactgccaaatattactggaagctgtacaa
aaggagaacatggagctaaccacaaacctgggttctgagaaagaagccagaaaggaggct
gaggagcagcgggaatatctgtcttctgaaaacaagaaccttttatcaaagctgtctgct
ctggaacttgatctagcttcaatgaaagaggcaatgaatgctggcagtagcagatgcgaa
agtttggaggttgagttgtgttcctccaaggaaaacatggaacaaacattgaccgagtta
gcaaactgcagggctttcttggaagagtcacaaaaagataatctcgagttatctaaattt
tttgccgttgaaaaagaaacaaacatgaaactcaaggaggataatgtgcgtcttctcaat
gagaaggagatgcttttatcagacctgtctgaactaaacaacaaattgcatctttcatat
gccaaacataagcagcttgagtcgcatgttagagatatggaaacagacatcgaacaactc
acagagcaactaattgaggaaagcatgtatgcaaccaacagttttgatatttaccaatct
gcaatgaaagagctggatgctaagtgcaatgtggtgctaggccaagcccagacagtcgtg
catcaagaaaatgaacaccatttggactcatcagaaatcactgttgaaaattcagaaaga
acaattacaagtcctgcgtttgttggtgatggtaataatcagtattcccatcctctgttc
agcgagaataactcatgtgactctactgctctgcagtcactgaagggccatctagagatc
gcgaaaggtgaattgtatgaacttcaaaagttagttcataggatttcttctaggtctgac
ggacgtgtccttgtatcaaaactcattcaatcttttgagacaaaagaaaatcaggaagat
cctggaatgtctgagggggagcatgatgatttgaaaaagctaactcaagagatgatattc
agccttgtggaaaagttgaagtcaatgacttcagatcttgcaaaaactgaaaagtatgtt
gttgaactgtgtgacaaaatagagctttccagcaagtctgaagtgcagcatgaagcagaa
aggcaacatactgcaattcttgaggccaaaatggatgggcttgctgagaagctaaacaac
tacaacaacacaattgatcaactgcacattcagcttgctaatgtacagctggatgcagat
aatcatgctggaaaactcaccaatcaagccacacttttggatcatgatgttacagaaagg
attttcattcttgagaaggagagggcatctctatcaaatctgctcattgaaataaccaat
aagcttagttctttgagaagtaacgagttctctaatgatttgggcgaaaatgaagggctc
ggctcttgtattttgaattctctagatcttgctgcgaaatcaatccaaagtcttcaggac
aaattagaggctgctcaaagcgagaatgctaatctcaatacttctctgttggagatcaag
aaagcacattctgatgttcaagagaggagtgaaaaagcatctggaatggttaagcacatg
tgtgataccttgcaggaacttctacgcgactcgcttggaaattcagatgaagcagttgca
gggtataatgctgaggaactaattgaagttctgtttagtcatgttggtggaattgttgag
catttgaagaatctgttgcatgaccgtcattctttgcaagcaaacaatgctaacctcgag
tcaagattgttgagcaaatgtgaagaagttgaagagctcagcttgagatgcagttctcta
acaaaaaatatggatgccatctgcttgctgaatgaggagcttaatttagtttcttcgaat
aaaagtgcagcgcaggatgagctgcacagtagatgcctcgctatagcagtaaatatgatg
cactactctgcaagtaatacctcaatagttattcctttgatgtctaatagtggtgaggct
gaagcattcagcaaggatcagcatattcttaccacattactgccatgtattgaggagggt
gtggcttcatacaatgagaaacttgaaaatgcagttgaagaaatccacttatcaaagata
tgcttgcaaaatgcccatatgtttgaccaaatttcatttgacaagtgggccttgcccttg
cctgcgttgctcaaagaagaaattgtacccaaggtttgtgaattgcagggccaaattgat
cagctcagtgcgttgaacattcagttagaaactgaagctccagtcctcaaggatggcttg
aaaaagcttgatgaagctattcaaacttcacatgctgagcttcagaaaaggtcttctgaa
cttgagcaatcagagcagaaactttcttctgtcaaggaaaaacttggtattgctgttgca
aaaggcaagggtttgatagtgcaacgtgacagccttaagcagtctcttttggagaagtct
ggtgagcttgagaagctctcacaagaattgcagtcaaaggatgcattagtgaaagagttg
gaagccaaactgaaatcctatacagaagcagatcgtattgaggctttggagtctgagctc
tcatatatacggaattcagctactgctttaagggactcattccttctaaaagactcagtt
cttcagaaaattgaagaagtcttagaagacctagatttaccagagtattttcattctaga
gacatagttgagaaaatagaactgttaacaaagatggctgttggtgcttcttttaccatg
cctgatggtgataagaggtcctctgtggatgggcattccgagtctggtctggccatggat
agcataaatgatgagcaaatctcgaattcaaatccagggtctgatgatataaagatcaaa
tatgacgagctgaataggagattctatgaactggctgagcacaacaacatgttggaacaa
tctctagtggagaggaacagtattttacagaaatgggaagaagtccttggtcaggttagc
gttcccccacagttcagaatgttggaaccagaggacaggataacatggctgggaaacaga
ctatcggaggttgagaatgaaagagacacaatgcatttgaagattgaacaccttgaggat
tcctctgagatgctaattactgatttagaggaatcacacaaaaggatttctgaacttagt
gcagaggttgttgctatgaaggctgagaaggacttcttctcacagagcctggagaaactg
agatttgagttccttggactctctgagaaagcagttcaagatgagtttgtcagagacaac
ttgcgaaaagatctagctgaactgcaggagaagttagctgagaaagccaaggagagcaag
cattatcatgatatggagatagaggtatacaaactactggatttggtgcgaaatgtgctg
caggatggtactggcagtaatgctgaaattccagctggtgatgttgtattgcaattgggt
gaattattgaggaaggttttagaccactatgcgtctcttttgtcagagtcaactttaggc
aatgctgcagggaaggaaattcatttagaggaaaccaggccatttaatgacgctacatca
gagacaagtagagatgacaaagagaatgcactgaatatttttagtagcgagttagagcat
gcccgcagcagtttggccttagctgagcagcagaggaatgaagctttggagaaggcagaa
tcactgatactggaagtggagacgctacatgctgaaataaatcaattgcagctagttggt
gttgagcagactcaaaagtatcagttgcttgtgcttgaacttgaatcagtaggtaagcaa
cgggatgatctgattgagaagctaaatcagagtactgagttagagcattctcttagtagt
ctggccttggctgagcagctccgtgatgatgctgttcagaaggcagaatcactggtactg
gaagtggagacactacaggctcaaataaaccagttgcaggaaggtggtgtggagcagact
caaaaatatcagtcgcttgtacttgaactagaatcaattggtaagctgcgggatgatttg
caagagaagctaaatcaggaggagcaaaagagcgcttcactgagagagaaactgaatatc
gctgtcagaaaagggaagggtctggtgcaacatagagatagcttgaagcaaactatagaa
gagatgaatgctgtggtagagaaacttaaaaatgaaaggaatcaactcacagaatcactt
gaatctgagaaatccttattgatgggccgattgactgagaatgagaagagcttgcatgat
acaacccaatacttgagtagattgttaaatgctctgggtactgtggatattgctcgagaa
ttcgatgcagatccaatcgccaagatcgaaaaaattgcacagttttacattgacctgcaa
gcaatagcggtttcatcacaaaatgaagtgaaaaaatcgaaacgagcaaccgagctgctt
ctagctgagttaaatgaagctcacgaaagggtcgataacctgcaggaggaattagtcaag
gcagaagctgcactgtctgagtcctccaaaaagaaccatgtcatagagtctgcaagagca
gatgctgtccgccagctcgaacatattatgcatttgcaggcactggcagaaaggaagcag
atagatcatttgaaggagttgaactctaccagtggtgaactaaaagaagtttgccttgaa
ctttcacaccgtcttgtcagcgcattcagtaaagatttggaccttatctactatgtagag
agtttcatgaaatcttccggtaaatggatggacggcacaaatttggtggatatacccatc
acttctaaccatctgttgtccaatagcaaaagcagcaagaaagctcatattccaaattct
ccactagaattcacagtggatgatactcatgaaagtcagcttctgcatcatcttgcaatt
acatgccatgctgtatctgattgtgtaaaggattgcaatgatctcaaaaggaacattgac
gagcatggtttttcagttgaccagaaagctacagagctatttgatgttatgtccaacttg
cagaacagattcacttctcaaaataaagagttagaatcttcgagagaaaacgttgttgaa
ctgcaatcaaagatcaatgagaaagaagaggaatgtttgtcaatgcgtagaaacatgagt
ttgctttacgaagcatgtactagctcagtttctgagattgaaggaatgactggtatggag
tctggcaaccggagctattttgttgggcagaaccatttatcttcatatgaccatataaaa
tcagtagttgaccagttgggtgcagctgtaaagactactcggtacagtaatgaagggaac
acgaaggaactgaaggctactgttcttgagttgcagcaggagcttcaagaaaaagatgtg
caaattagcacaatcagttcggagcttgcatctcagataagggatgccgaatcttctgca
aagcagctttctgttgagcttgaagatgcaagaattgaagtctgcaatttggagaaacat
gttgagttgttgcttaatcagaagaaagctttagagactcaagtaagtgagcttaaagat
ttggagacagtggcaagtgagcagcatggaagattaaaggagttgactgatgaactcacc
agaaaagaccaagagattgaaggtttgatgcaagcacttgacgaagaagaaaaagagctt
gaagtcttggagaacaaaagcaacaacttggagcagatgctgcaagacaaagaatttgct
ttaaagagccttgaagtttctaggacaaaagctctgactaaacttgcaacaactgttgac
aagtttgacgagctgcatagcttgtctgaaagtcttcttgtagaagtggaaagccttcag
tcacaattgcaagagagagattcagagatctcttttctgcgtcatgaagttacaaggagt
actaatgaactactaaccactgaagatatcaacaagaagtacctatctcagataaatgat
tttattaagtggtcagaaactgcactcttgcagtttggtgtgcattgcgacatcgcagat
gattatgattgcactcagcttcctgtatatatggatatgttggacaagaaaataggatct
ctgatatctgaatcaggtgatttgagggttgctgtgcaaagcaaagattcttcactgctt
gcggagaggaccaaaatggaagagttgagccgtaaatcagaggctctagcagcttctttg
agccaaaaggattctcagatagggttacttcggcgagacagaacattgggccaagctagc
agatccataaatttgccaggcacttcggagattgagcaaatgaatgacaaagtaagccca
gctgcggttactcagattagaggggcacgaaaagtcaacaatgaccaagttgctattgac
gtagagatgcacaaggacaagccattagatgatgaagacgatgacaaagcacatggtttc
aagtccctgacaatgtcgcactttgtaccgaagttcactcgacctatatcagacagaatt
gatgggatgtgggtatctggtgaccggttgctaatgaggcaacctactttgagagttggc
atcttgatatattggattgcgctgcatgcattgcttgcaagttttatttga
DBGET
integrated database retrieval system