Brachypodium distachyon (stiff brome): 100845304
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Entry
100845304 CDS
T01717
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100845304
Membrane trafficking [BR:
bdi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100845304
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
100845304
NCBI-ProteinID:
XP_010234924
UniProt:
A0A0Q3FEA1
LinkDB
All DBs
Position
3:33456361..33475020
Genome browser
AA seq
1843 aa
AA seq
DB search
MSAADLVVADATAREWQRFKLIPRVSCAGNLDLDPLLNENLEQWPHLNELVQCYKADFVK
DDCKYGRYDSVAPPSFRSQIFEGPDTDIETELQLCNARHSKPEETTEDDMPSTSGRQIYE
TEPCASSSNKPCSLSPLPAYEPAFDWNNERSLIFGQRVTESLPATHISGLKITVKVLSLS
LEAGLVEPFGGTICLYNRDRREKLSEDFCFRILPTEMQDAHISLDRWSVFSLDAPSPSVC
LLIQLEKAATEEGGVTPSVYSRKEPVHLTEKEKQKLQIWSRIIPYKEPFAWAMIPLFENN
HAGGVGDAVSPSSPLAPSISGSSSQDSIVEPTSKLALEGKLNHYSSGSSVIVDISNLNKV
KESYIEDSLQDPKRKVHKPVKGVLRLEVEKLHNDRNDTDTISEGGSMNNELHGAELNNGR
HHRNSFDGAHSYLNSSAVVQKNARQNGQNSNAENGDNFQAFDFRMMTRSEPFSQLFHCLY
VYPLTVSLSRKRNLFVRVELRKDDADIRKLPLEAIHPRDWSTTLQKFVHTQISVGTRMSC
FHDEVKISLPALLTPQHHLLFTFFHVDLQMKLEAPKPVIVGYAALPLSTHIQLLSDVSLP
ILRELVPHYLQESGKERMEYLEDGKAVFRLRLRLCSSLFPVNERIRDFFVEYDRHTLHTS
PPWGSELLEAINSLKNVESTALLQFLHPILNMLLRLIGDGGETLQVAAFRAMVNILTRVQ
QESSDGAERNRFLVNYVDFAFDDFGDRQTPVYPGLSTVWGSLARSKAKGYRVGPVYDDVL
AMAWFFLELIVKSMGLEQSHLFYHNLPQGEDVPPLQLKEGVFRCIMQLFDCLLTEVHERC
KKGLNLAKRLNSTLAFFCYDLLSIIEPRQVFELVSLYMDKFAGVCQSVLHDCKLTFLQII
CDHDLFVEMPGRDPSDRNYLSSVLIQEIFLTLDHDDLLQRAKAARILVVLISKHEFDTRY
QKSEDRLYIAQLYFPLIGQILDEMPVFYNLNAVEKREVLVLILQIIRNLDDTTLLKAWQQ
SIARTRLFFKLLEECITHFEHSRAGDSLLLGSSSRSPDAERPVSPKYSDRLSPSVNAYLS
DASRHEIRLQGTPENGYMWNRVIPQLSSPNQPYSLREALAQAQSSRIGSTARALRESLHP
VLRQKLELWEENLSTAVSLEVLGIIEKFSVAAASRSISTDYTKLDCVTSILMGLLSRSQP
LTFWEAFLPVVYNIFSLHGATLMARENDRFLKQIAFHLLRLAVFRNDSVRKRAVVGLQIL
VRNSFNYFKSTTRLRVMLTITLSELLSDVQVTQMKSDGSLEESGEARRLRKSLEEMADVR
SKDQLNECGLPVNALEVSAEGSTDNRWSWVEVKHLSKCLVQALDAGLEHALLGSVTTLDR
CAAAEGFYKLALAYAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVIMQALVGRN
DAVWSREHVASLCRICPIVGTDVGAEVSAAEVEGYGASKLTVDSAVKYLQLANKLFAQAE
LYHFCASIQELIIPVYKSRRAYGQLAKCHKSLTNIYESILEQEASPIPFIDATYYRVGFY
GDRFGKLNKKEYVFREPRDVRLGDIMEKLSHTYEAKMDGNQNLHIIPDSRQVNADELQPG
VCYLQITAVDPVMEDEDLESRRERIFSLSTGTVRARVFDRFLFDTPFTKNGKTQGGLESQ
WKRRTVLQTEGSFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGD
QLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCK
RAIRVHFRLIGEEDQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagcggatctggtggtggcggacgcaacagcgagggaatggcagcggttcaag
ttgattccaagggtgtcgtgtgctgggaacctggacctggatccactgcttaatgaaaat
ttagagcaatggccacatctaaatgagttggtacagtgctataaggctgattttgttaaa
gatgactgcaaatacggacgatatgatagtgtcgcaccaccgtcctttagaagtcaaatt
tttgagggacctgataccgacatagaaacagaattgcagctttgcaacgctaggcattcc
aagcccgaggaaactactgaagatgatatgccaagcacctcagggaggcaaatatatgag
actgaaccgtgtgcttcatcttcaaacaaaccctgtagtctctcacctttaccggcatac
gaacctgcatttgattggaacaacgagagatctttgatatttggccaacgggtgacagaa
agtctccctgcaacacacatcagtggattgaagataactgtgaaggtgttatctttgtca
ttagaagctggattggtagaaccttttggcggtacaatctgcttgtacaacagagataga
agagaaaaactatctgaagacttctgtttccgcatacttccaacagaaatgcaagatgct
catatttctttggaccgttggagtgttttttcgttggatgccccttcaccatcagtctgc
cttctgatccagcttgaaaaagctgctactgaagaagggggagtaactccttccgtttat
tcccgcaaagaacccgtgcacttgactgagaaagagaagcagaagctgcaaatttggtct
cgaatcattccatataaagagccatttgcatgggcaatgattcctctgtttgaaaacaac
catgctggtggtgtgggtgatgctgtgtctcctagcagccctttagcaccaagtatttca
ggctcaagttctcaagatagcatcgtggagcctacttccaagctcgctttggagggaaaa
ctcaaccattattcaagtggaagctcggttattgtagatatatcaaacttaaacaaagtg
aaggaaagctacatagaggactccctccaggatccgaaacggaaagtacacaaaccagtt
aaaggtgtactgaggctagaggtggaaaaacttcataatgaccgtaatgatacagatacc
atttctgaaggcgggagcatgaacaatgagttgcatggtgctgaactcaacaatggcaga
catcacaggaatagctttgatggggcccacagttatctgaattctagtgctgttgtccag
aaaaatgcacgccagaatggtcaaaattccaatgcagagaatggtgacaattttcaagct
tttgactttcggatgatgactcgaagcgaaccattttctcaacttttccattgcctctat
gtgtacccattgaccgtcagcttgagccgcaagagaaatctattcgtaagagtagaattg
agaaaggatgatgctgacatccgtaaacttccactggaggctattcatccaagggattgg
agtacaacgctacagaagtttgtccatacgcagatttctgttggcacgagaatgtcttgc
ttccatgatgaagtgaagatcagtctgcctgctctattgactccccaacatcatcttctg
ttcacattcttccatgtagatctccaaatgaaacttgaagcccctaaaccagtgattgtg
ggatatgccgcacttccactgtcgacacacattcagttactttcagatgtatctttgcca
attttacgagagcttgttccgcattacctgcaggaaagtggaaaggagagaatggaatac
ctagaggatggaaaagctgttttcagactgcggttaagactttgctcttcgttgtttcca
gttaatgaaaggataagagacttttttgtcgagtatgaccgccacacactacatacaagt
ccaccttggggctctgagcttcttgaggccataaatagtttgaagaatgttgaatctact
gcattgttacaatttcttcacccaatactcaacatgctgctgcgtcttattggtgatggt
ggtgaaacacttcaggttgctgcatttcgagccatggttaatattctaacccgggttcaa
caggaatcatctgatggggctgagagaaataggtttcttgttaattatgttgattttgct
tttgatgactttggtgatcggcaaacacctgtataccctggtttatctactgtttggggt
agcctagctcggagtaaggctaaaggttatagagttgggcccgtctatgatgatgtgttg
gcaatggcttggttttttctggagcttattgtaaaatcaatgggattggagcaaagtcat
ctcttctaccacaatcttccacaaggtgaagatgtcccaccgctacagttgaaagaaggt
gtattcagatgtatcatgcagctgtttgattgccttttaactgaggttcatgaacgctgt
aaaaagggtttaaatttggcaaagcgcttgaacagcactcttgctttcttttgttatgat
cttttatcaatcatcgagccacgccaagtttttgagctggtgtcgttgtatatggacaag
tttgcaggggtttgtcaatcagttctccatgattgcaaattgacattcctgcagataata
tgtgatcacgatctttttgttgagatgcctggccgggacccctctgataggaattatctc
tcgtctgtccttatccaggagatctttctcacccttgaccatgatgatttattacagcga
gcaaaagcggctcgtattttggttgtcctgataagcaagcatgaatttgacacacggtat
caaaaaagtgaagacaggctgtacattgctcagctgtatttccctcttataggacagatt
ctagatgagatgcctgtgttctataatctaaatgctgttgaaaagcgtgaagttctagtg
ctcattttgcaaatcataaggaacttggatgacacaactcttctaaaagcgtggcaacag
agcattgctagaaccagactgttcttcaagctacttgaagaatgtataacccattttgag
cacagtagagcaggagatagtttgctgctaggctctagttctcggagtcctgatgctgag
cgccctgtgtcccccaagtattctgatcgattatccccatcggttaacgcatacttgtcc
gatgcttcacgccatgaaataaggcttcagggaacaccagaaaatggatacatgtggaac
agggttattcctcaactaagttccccaaatcaaccctattcattgagggaagcacttgct
caagcacaatcttcaagaattggatcaacagccagggcattgagagagtctctacatcca
gtactgagacagaagttggaactctgggaagaaaatcttagtaccgctgtgagccttgaa
gtattgggaataattgagaagttttcggttgctgcagcttctcgtagcatctctactgat
tacactaagctagattgtgtgacatctatcttaatgggtcttttgtctaggagccagccc
ttaactttttgggaagcttttcttcctgtggtctataatatattcagtcttcatggtgca
acactgatggcacgggagaatgaccgcttcttgaagcaaattgcttttcatcttttacga
cttgctgtattccgaaatgattctgttagaaaaagggccgttgttggattgcagatcctt
gttaggaactcattcaactatttcaagagcaccacaaggttgagggtcatgttgactatt
actttgtcagaattgctgtctgatgtgcaagtaactcagatgaaatctgatggttctctt
gaagaaagtggtgaagctcggcgtcttagaaaatcactagaggaaatggctgatgtcaga
agtaaggatcagttgaacgaatgtgggctccctgttaatgcactggaggtgtctgctgaa
ggttccacggacaacaggtggtcttgggtagaagttaaacatctatcaaaatgtctagtc
caggcccttgatgctggccttgaacatgcccttttgggttctgtaacaactctggacagg
tgtgcagctgctgagggtttctataagctagcattggcctatgcacctgttcccgatctt
catattatgtggttactgcacctatgtgacgcccaccaggagatgcaatcatgggctgaa
gctgcgcaatgtgcagttgctgtagctggtgtgatcatgcaggcacttgttggaaggaat
gatgctgtgtggagcagggagcatgttgcttccctgtgtaggatctgtcctattgtcggc
actgatgtgggtgcagaagtatctgcagcagaagtggagggatatggtgcatccaagctt
actgtggattcagctgtgaagtatcttcaacttgccaacaagctcttcgcacaggctgaa
ctataccatttttgtgctagcattcaggaactcataattcctgtgtacaagagcagaagg
gcttatgggcaactggctaagtgccataagtcgctcacgaacatctatgagtcaattctt
gagcaggaggctagccctattccattcattgatgccacatactacagagttggattttat
ggggatcgatttggcaagctcaataaaaaggagtatgtgtttagagagccacgggatgtt
cgtctgggtgacatcatggagaagcttagtcacacctatgaggctaagatggatggcaat
cagaatttacacataattcctgactcgagacaagtcaatgccgatgagctgcaacctggt
gtctgctatctgcagataactgctgttgatcctgtaatggaggacgaggacttggagagt
aggagggaaaggattttctctttatctactggcactgtgcgtgcacgcgtgtttgaccgt
ttccttttcgatacaccattcacaaagaatgggaaaacacaaggtggtctcgaatctcaa
tggaagagacgcacggtactccaaacagagggctcatttcctgctttggtaaatcgcctg
ctagtgatcaaatctgaatctctagaattttcgcctgttgagaatgcaattgggatgatt
gaaacaaggacagctgcattgagaaatgaactagaagaaccacgtagttctgaaggtgat
caactaccaagacttcaaagcctgcaaaggatactccaaggaagtgtagctgttcaggtc
aacagtggtgtattaagtgtttgcactgctttcttatctggagagcctgcaaccaggctc
agatctcaagaactacagcagctcatcgctgcactgcttgaattcatggctgtttgcaag
cgcgcgatccgtgtgcattttagattgataggggaagaagaccaggaattccacacgcaa
cttgtcaacgggtttcagtcgcttactgctgagctttcccactatattcctgctatactt
tcggagctatga
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integrated database retrieval system
