Brachypodium distachyon (stiff brome): 100845610
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Entry
100845610 CDS
T01717
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100845610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100845610
Spliceosome [BR:
bdi03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
100845610
Complex B
100845610
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
100845610
NCBI-ProteinID:
XP_003573746
UniProt:
I1I319
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All DBs
Position
3:20485572..20490908
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AA seq
475 aa
AA seq
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MGDYGNAMMRGNPDGGVQGRPKGVARANVQQLKLMGQGHPTGLTPNLLKLFEARPPLEHK
PPVEKRKLPAYTGMAQFVSRFAEPGDQEYAPPVPTCETRAEKKDRIQKFKLEQGAAKVAE
DLLKYDPQSDPNTTGDPYKTLFVARLNYETSESRVKREFEAYGPIKRVRLVTDKETNKPR
GYAFIEYMHTRDMKNAYKQADGRKVDNKRVLVDVERGRTVPNWRPRRLGGGLGSSRISGQ
NADQKPSAREQPSAGRPRSEEPKRDDRRVDRDREKSRERVRERDRDEKPRERSHDRTRER
DPREERHHHRDRDRTRDRDRGRDREKDHGRDRDRRDRDRDRDRGRDHDREKDRGRSHDRH
RERGRDRERDHERPSHERERSHLHERDADYANGEPKHDRKLSDYGQDYGYNQHEQHRSHE
AYTYGQDGRGHETERSKRHEHEYYQAQPNTEPEGPEEGEAYEEGDYQYHQAAEET
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgggcgactacggcaacgcgatgatgcggggcaacccggacggcggcgtgcagggccgc
cccaagggggtggcccgcgccaacgtccagcagctcaagctcatgggacagggccacccg
acggggctcacgccgaacctgctcaagctgttcgaggctcggccgccgctggagcacaag
ccgcccgtcgagaagcgcaagctgccggcctacacagggatggcgcaatttgtgtcgcgg
tttgcagagcctggggatcaggagtacgcccctcctgtccccacttgcgagactagggct
gaaaagaaggatagaatccagaaatttaagcttgagcagggtgcagctaaggttgctgaa
gatcttctgaagtatgacccacagagtgaccccaataccactggagatccatacaaaacg
ctatttgttgcaagacttaattatgagacgtctgaaagtagggttaagcgggagttcgaa
gcttatgggcctattaaaagggtacggcttgtaactgacaaggaaacaaataaacctagg
ggatatgcattcatagagtatatgcatactcgggatatgaaaaatgcttacaagcaagca
gatgggagaaaagtagacaacaagagggtactagttgatgtggaacgtggtagaactgtt
ccaaattggcgtcccaggagattaggtggtggacttggatcaagcagaattagtggtcaa
aatgctgaccagaagccctctgctagggaacaaccaagtgctgggcgccccagatcagag
gagcctaagagggatgatcgtcgtgtagatcgggatcgggagaagtctcgtgaaagggta
cgcgaaagagatcgagatgagaaaccccgtgagcgctcccatgaccggactcgtgaacgt
gatccaagagaagagaggcaccaccatagagatcgggacaggactcgggacagggaccga
ggaagggatcgggaaaaggaccatgggcgtgaccgtgatcgtcgtgatagagatagagac
agggatcgtggtcgggatcatgatagagaaaaggaccgtggccgctctcatgaccgccac
cgtgagagaggcagggaccgtgagagagatcatgagcgtccaagtcatgaacgtgaacgc
agtcacttgcatgagagggatgctgattatgccaatggtgagccaaaacatgatagaaag
ttgtctgattatggccaagattatggctacaatcagcatgagcaacacagaagtcacgag
gcatatacttatggtcaagatggacgtgggcatgaaacagagcgctcaaagcgacatgag
catgagtactatcaggcacaacccaacacagaacctgaaggcccagaggaaggcgaggca
tatgaggaaggagactaccagtatcatcaagcagcagaagagacatga
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