Brachypodium distachyon (stiff brome): 100845877
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Entry
100845877 CDS
T01717
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100845877
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bdi01009
]
100845877
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100845877
Protein phosphatases and associated proteins [BR:
bdi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100845877
Spliceosome [BR:
bdi03041
]
Common components
Common spliceosomal components
SR proteins
100845877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
100845877
NCBI-ProteinID:
XP_003563264
UniProt:
I1GV94
LinkDB
All DBs
Position
1:25474169..25478610
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AA seq
272 aa
AA seq
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MADSPRKRYSSRPSRSPSPYKGRTKSRSRSPAAQSQSRSPPPDPRSQARSRSRSPEREPD
AGNHGNTLYVTGLSSKVTDRELKDYFNKEGKVVSCHVVLEPHTRVSRGFAFITMDTVEDA
ERCIKYLNQSELQGRHITVEKSRRGRPRTPTPGSYLGHRYERREQQRGGRFRRGYGRDEY
YGNSYRRSPPPMYSYRDTRDYPPYRDSRDYSPHRDARDYYDGRGGRGYSPQRSPPPYGGR
SRRERSRSLPYSPYRMPERGYGRRTGGGGYDR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggccgactcaccgcgcaagaggtactcatcaaggccctcaaggtccccatctccttac
aaaggacgcacaaaatcaagatcaagatcacctgcagctcaatcccagtctagatctccg
ccgcctgaccctagatcacaggcaaggtcaagatcaagaagccctgagagggagcctgac
gctggaaatcatggaaatactctgtatgtgactggactttcttctaaagttactgacagg
gaacttaaagattacttcaacaaggaaggaaaggtggtttcttgccatgttgttcttgaa
ccccacacacgtgtctcgcgtggatttgcttttatcaccatggacactgttgaagatgct
gaacgctgtatcaagtatcttaaccagtctgaactgcaaggccgacacatcacggttgaa
aagtcacgccgaggtcgcccaaggacaccaactcctggaagttacctaggccatcgctat
gaacgtagagagcagcagcgtggtgggagatttcgcagaggctatggtcgtgacgagtat
tatggcaacagctaccggaggtccccacctcccatgtactcctacagggacactcgagac
taccctccctacagggacagccgagactactccccccacagggatgctcgggactactac
gatggtaggggtggtcgaggttactccccccagagatctcctcctccttatggtggtagg
tcaagaagggaacgttctagatcgttgccgtattccccttaccggatgcctgaaagaggc
tacggccgccgaaccggcggtggtggctacgacaggtaa
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