Brachypodium distachyon (stiff brome): 6439897
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Entry
6439897 CDS
T01717
Symbol
rbcL, BrdiC_p033
Name
(RefSeq) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00630
Glyoxylate and dicarboxylate metabolism
bdi00710
Carbon fixation in photosynthetic organisms
bdi01100
Metabolic pathways
bdi01110
Biosynthesis of secondary metabolites
bdi01200
Carbon metabolism
Module
bdi_M00165
Reductive pentose phosphate cycle (Calvin cycle)
bdi_M00532
Photorespiration
bdi_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
6439897 (rbcL)
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
6439897 (rbcL)
Enzymes [BR:
bdi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
6439897 (rbcL)
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Gene cluster
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Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
6439897
NCBI-ProteinID:
YP_002000495
UniProt:
B3TN59
A0A0Q3NL75
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Position
Pltd:54293..55723
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AA seq
476 aa
AA seq
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MSPQTETKASVGFKAGVKDYRLTYYTPEYETKDTDILAAFRVSPQPGVPPEEAGAAVAAE
SSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEDSQWICYVAYPLDLFEEGSVTNMFTSI
VGNVFGFKALRALRLEDLRIPPTYSKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
SAKNYGRACYECLRGGLDFTKDDENVNSQPFMRWRDRFVFCAEAIYKSQAETGEIKGHYL
NATAGTCEEMMKRAVFARELGVPIVMHDYLTGGFTANTTLAHYCRDNGLLLHIHRAMHAV
IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRAR
GIFFTQDWVSMPGVIPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAAAN
RVALEACVQARNEGRDLAREGNEIIRAACKWSPELAAACEVWKAIKFEFAPVDTID
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccacaaacagaaactaaagcaagtgttggatttaaagctggtgttaaagattat
agattgacttactacaccccggagtatgaaaccaaggatactgatatcttggcagcattc
cgagtatctcctcaacctggggttccgcccgaagaagcaggggctgcagtagctgccgaa
tcttctactggtacatggacaactgtttggactgatggacttactagtcttgatcgttac
aaaggacgatgctatcacatcgagcctgttcctggggaagacagtcaatggatctgttat
gtagcttatccattagatctatttgaagagggttccgttactaacatgtttacttccatt
gtaggtaacgtatttggtttcaaagccctacgtgctctacgtctggaggatctacgaatt
ccccctacttattcaaaaactttccaaggcccgcctcacggtatccaagtggaaagagat
aagttgaacaagtatggtcgtcctttattgggatgtactattaagccaaaattgggatta
tctgcaaaaaattacggtagagcgtgttatgagtgtctacgtggtggacttgattttacc
aaagatgatgaaaacgtaaactcacaaccatttatgcgctggagagatcgttttgtcttt
tgtgccgaagctatttataaatcacaggcggaaaccggtgaaatcaaggggcattacttg
aatgcaactgcgggtacatgtgaagaaatgatgaagagagctgtttttgcgagagaatta
ggtgttcctattgtaatgcatgactacttaactgggggattcaccgcaaatactactttg
gctcattattgccgcgacaatggcttacttcttcacattcaccgtgcaatgcatgcagtt
attgatagacagaaaaatcatggtatgcatttccgtgtattagctaaagcattgcgtatg
tctgggggagatcatatccacgccggtacagtagtaggtaagttagaaggggaacgcgaa
atcactttaggttttgttgatttattgcgcgacgattttattgaaaaagatcgtgctcgc
ggtatctttttcactcaggactgggtatccatgccaggtgttataccagtagcttcaggt
ggtattcatgtttggcatatgccagctctgaccgaaatctttggggatgattctgtatta
caatttggtggaggaactttaggacatccttggggaaatgcacctggtgcagcagctaat
cgagtggctttagaagcctgtgtacaagctcgtaacgaagggcgcgatcttgctcgtgaa
ggtaatgaaattatccgagcagcttgcaaatggagtcctgaactagccgcagcttgtgaa
gtatggaaggcgatcaaattcgagttcgcgccggtagatactatcgattaa
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