KEGG   Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_1860
Entry
BBDE_1860         CDS       T04222                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
bdn  Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bdn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BBDE_1860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bdn03400]
    BBDE_1860
Enzymes [BR:bdn01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BBDE_1860
DNA repair and recombination proteins [BR:bdn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BBDE_1860
 Prokaryotic type
     BBDE_1860
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5 HHH_8
Other DBs
NCBI-ProteinID: BAQ27854
LinkDB
Position
2237756..2238385
AA seq 209 aa
MHHEYEELCETIPEPKCALNFTNPFELLVATVLSAQTTDKRVNMVTPVLFGRFPGPADLQ
AADPEQVEDIIHSIGFHRTKTKNIIRLSHDLCERYDGTVPDSMEELTALPGVGRKTANVV
LGNAFDKPGFPVDTHVIRVTGRLHWRSDWASPTPDPVAIEREITACFPPSEWTDLSHRLI
MHGRTTCHARKPNCLDCPLNDTCPSAFKV
NT seq 630 nt   +upstreamnt  +downstreamnt
atgcaccatgaatacgaggaattgtgcgagacgattcccgagccgaagtgcgcgctgaat
ttcaccaatccctttgagttactggtggcgaccgtgctcagcgcccagaccaccgacaag
cgcgtgaatatggtcacgcccgtgctgttcggccggtttccgggacccgccgacctgcag
gccgccgatcccgaacaggttgaggacatcatccattccatcggcttccaccgcaccaaa
acgaagaacatcatcagactctcgcacgacctgtgcgaacgatatgacggcacagtgccc
gattcgatggaggaactgaccgcattgcccggagtcggccgcaaaaccgcgaacgtggta
ttgggcaacgccttcgacaaaccaggatttcccgtcgacacgcatgtgattcgtgtgacc
ggacgtctgcactggcgtagtgactgggcttcgcccactccggatccggtggccattgaa
cgcgaaatcaccgcatgcttcccaccctcggaatggacggacctgtctcaccggctgatc
atgcatggcagaaccacctgtcacgcccgcaaaccgaactgcctcgactgcccgttgaac
gatacctgcccgagtgcgttcaaggtgtag

DBGET integrated database retrieval system